Gene Dfer_5167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5167 
Symbol 
ID8228777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6232680 
End bp6233603 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content47% 
IMG OID644933017 
ProductRelaxase/mobilization nuclease family protein 
Protein accessionYP_003089531 
Protein GI255038910 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.955908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGGAT CAAGTTTCGG AGGGGCAGTC AGGTATGTCA TGCAGAAAGA GCAGGCTATC 
GTGCTTCATG GCGAAGGCGT CAGGACCCAG GATATGAAGT CAGCTATCCA TGACTTCAAT
GCTCAGCGCC AGATGAATCC CGAGCTGGGA AAGGCTGTCG GCCACCTGGT GCTGAGTTGG
AGTGCGTTTG ACAAGGATAA GCTCTCACAA AAAGTCATGG TCGAGAGGGC TGCCGAATAT
ATGACCAAAA TGAAAATCCA GAACACCCAG TATCTGATCG TTGAACATCG CGATACCAAT
CAGCCGCATA TTCATATTCT CTACAACCGG GTTGATAATG CTGGCAAATC CATTTCGGAC
CGCTTTCAGA AGCGATTGAA TCAGAAGGTT TGCAAGGAGA TGACTTTGGA ACATGGCTAC
TACATAGGCA AAGGAAAAGC GCTGGTTAAC CGGGGCAAGC TTAGGGGACT GGATAAAATG
CGTTACGAGC TGGCAGATCA AATTAGAATT GCTAGCAGGT CGGCAGTGAA TTGGAAACAA
TTGGAAGGAG CGCTTTCATC GAGCGGAATT ACACTCATCT ACAAATACAA GTCTGGTACC
GATCAGATTG AAGGTATTAG TTTCCAGAAG GATGGAACGG TGTTGAAGGG CTCAAAAGTA
GACCGAAGCA TGAGTTTTCT GGCACTTGAT AAAAAGCTGC GGGAAAATTT TCAGCAACAT
ATGTCGGTGA GGCGTCGGAT GTGGGAGCGT GGGACACCAC CACCGGCGCA AGAAAAAATG
CTATCTCACC GATATGGTTT GCCGAACTAT CCGGAGGAAA ACCTGCTGAA AGACTTGATG
GATCCCGTAA CGCAACACGA CACGACTAAT CCAGAGCTTA AAAGAAAACA CAAACGCAAA
AAATCGAGAG GATTACATTT ATGA
 
Protein sequence
MIGSSFGGAV RYVMQKEQAI VLHGEGVRTQ DMKSAIHDFN AQRQMNPELG KAVGHLVLSW 
SAFDKDKLSQ KVMVERAAEY MTKMKIQNTQ YLIVEHRDTN QPHIHILYNR VDNAGKSISD
RFQKRLNQKV CKEMTLEHGY YIGKGKALVN RGKLRGLDKM RYELADQIRI ASRSAVNWKQ
LEGALSSSGI TLIYKYKSGT DQIEGISFQK DGTVLKGSKV DRSMSFLALD KKLRENFQQH
MSVRRRMWER GTPPPAQEKM LSHRYGLPNY PEENLLKDLM DPVTQHDTTN PELKRKHKRK
KSRGLHL