Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5167 |
Symbol | |
ID | 8228777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 6232680 |
End bp | 6233603 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644933017 |
Product | Relaxase/mobilization nuclease family protein |
Protein accession | YP_003089531 |
Protein GI | 255038910 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.955908 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATAGGAT CAAGTTTCGG AGGGGCAGTC AGGTATGTCA TGCAGAAAGA GCAGGCTATC GTGCTTCATG GCGAAGGCGT CAGGACCCAG GATATGAAGT CAGCTATCCA TGACTTCAAT GCTCAGCGCC AGATGAATCC CGAGCTGGGA AAGGCTGTCG GCCACCTGGT GCTGAGTTGG AGTGCGTTTG ACAAGGATAA GCTCTCACAA AAAGTCATGG TCGAGAGGGC TGCCGAATAT ATGACCAAAA TGAAAATCCA GAACACCCAG TATCTGATCG TTGAACATCG CGATACCAAT CAGCCGCATA TTCATATTCT CTACAACCGG GTTGATAATG CTGGCAAATC CATTTCGGAC CGCTTTCAGA AGCGATTGAA TCAGAAGGTT TGCAAGGAGA TGACTTTGGA ACATGGCTAC TACATAGGCA AAGGAAAAGC GCTGGTTAAC CGGGGCAAGC TTAGGGGACT GGATAAAATG CGTTACGAGC TGGCAGATCA AATTAGAATT GCTAGCAGGT CGGCAGTGAA TTGGAAACAA TTGGAAGGAG CGCTTTCATC GAGCGGAATT ACACTCATCT ACAAATACAA GTCTGGTACC GATCAGATTG AAGGTATTAG TTTCCAGAAG GATGGAACGG TGTTGAAGGG CTCAAAAGTA GACCGAAGCA TGAGTTTTCT GGCACTTGAT AAAAAGCTGC GGGAAAATTT TCAGCAACAT ATGTCGGTGA GGCGTCGGAT GTGGGAGCGT GGGACACCAC CACCGGCGCA AGAAAAAATG CTATCTCACC GATATGGTTT GCCGAACTAT CCGGAGGAAA ACCTGCTGAA AGACTTGATG GATCCCGTAA CGCAACACGA CACGACTAAT CCAGAGCTTA AAAGAAAACA CAAACGCAAA AAATCGAGAG GATTACATTT ATGA
|
Protein sequence | MIGSSFGGAV RYVMQKEQAI VLHGEGVRTQ DMKSAIHDFN AQRQMNPELG KAVGHLVLSW SAFDKDKLSQ KVMVERAAEY MTKMKIQNTQ YLIVEHRDTN QPHIHILYNR VDNAGKSISD RFQKRLNQKV CKEMTLEHGY YIGKGKALVN RGKLRGLDKM RYELADQIRI ASRSAVNWKQ LEGALSSSGI TLIYKYKSGT DQIEGISFQK DGTVLKGSKV DRSMSFLALD KKLRENFQQH MSVRRRMWER GTPPPAQEKM LSHRYGLPNY PEENLLKDLM DPVTQHDTTN PELKRKHKRK KSRGLHL
|
| |