Gene Dfer_5158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5158 
Symbol 
ID8228768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6223995 
End bp6224921 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content48% 
IMG OID644933008 
Productlipid A biosynthesis acyltransferase 
Protein accessionYP_003089522 
Protein GI255038901 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA CTATCCCGCA ATACCCGAGA TCTTTATGGC GAACAATAGC GCAGCTATTA 
ACAGATCTGC CAGCCGCTCT TTTGAGTAAT GCGCTGCTTT GCCTGACGTC ACTCCTGTCA
ATTTTACTAT CCTTATTGCT TCGGTTTGTA CTGCAATACT GGAAAATAGT GATCCGGAAA
AATCTGATAA GTTCTTTCCC CACCAAGTCC GCAGAGGAGA TCCGTGGGCT GACAAGCGCA
TATTACCGCC ATATGAGCGA CCTATTGCTC GAACCTTTTT TGTTTTACCT GGCTCCTGAA
AGACTGAGAA AGCGCCTGGC TAAGTATAAT AATCCGGAAG TTTTGGAATT ACTCCACGCA
GACCAGCGGC CAGTAATAGT CTTCGCTTCG CACTACGGGA ACTGGGAATA TCTGATTAAT
CTTCCGCAAG TAACGGACTA TCCGGTCTAC ACAGCTTACT CGCCAATCAA AAATGGTCTG
CTCGACAGAA TGATGATCAG GTTGCGTTCT TTCCTGGGGG TCAAACTTAT TCCCAAGAAG
GGATTTTACC GGCAAGCGTT GTCGCTATTG CGCCAAACTG CTATCCCTAA CTTACTGGTG
GTCATTGCAG ATCAGCGGCC TGCGCCTGGC AGCGACAAAT TTCATATTTC ATTCCTGGAC
CAGGAGACTG CCGTTCAAAC GGGAGGAGAA CGGATGGCGG CTTCATCGCA GGCGGCAGTC
GTGTACGTTG AATCGCAAAA AAGGTCTCGT TTCAGCTACG AGTTCACATT TCGGCTGATG
GAGCACCCTG ACCGGTCAAC GCCCCTGAGC ATTACAAAGT CTTACTATCA TTTTCTGGAG
AATAGCATCA GCCGTGCCCC ATCTTACTGG TTATGGTCAC ACAACCGGTG GAAAATTCCG
GCGGCGGGTG CTATCCATTC ATCTTAA
 
Protein sequence
MKFTIPQYPR SLWRTIAQLL TDLPAALLSN ALLCLTSLLS ILLSLLLRFV LQYWKIVIRK 
NLISSFPTKS AEEIRGLTSA YYRHMSDLLL EPFLFYLAPE RLRKRLAKYN NPEVLELLHA
DQRPVIVFAS HYGNWEYLIN LPQVTDYPVY TAYSPIKNGL LDRMMIRLRS FLGVKLIPKK
GFYRQALSLL RQTAIPNLLV VIADQRPAPG SDKFHISFLD QETAVQTGGE RMAASSQAAV
VYVESQKRSR FSYEFTFRLM EHPDRSTPLS ITKSYYHFLE NSISRAPSYW LWSHNRWKIP
AAGAIHSS