Gene Dfer_5129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5129 
Symbol 
ID8228736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6193557 
End bp6194387 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content49% 
IMG OID644932977 
ProductRNA binding S1 domain protein 
Protein accessionYP_003089494 
Protein GI255038873 
COG category[S] Function unknown 
COG ID[COG2996] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.64066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATTTA TCGGAAAATA CAATTACCTG ACCATCGAGC GGGTCACCAG CGTAGGAATG 
TTCCTGAGCG ATGTGGAAGG TGAAGAAGTG CTTCTTCCAA ATCAATACAT CACCGACGAC
ATGCAGGTCG GCGACCAGAT CAAGGTATTC GTCTACCTCG ATTCCGAGGA TCGGCCGGTA
GCGACTACGC AAACGCCGAA AATCATCCGC AACGAGTTTG CATTCCTGGA AGTGAAGGAT
GTTTCCGAAT ACGGCGCATT CCTCGATTGG GGCCTCATCA AGGACCTTTT CGTGCCCTTC
CGCGAGCAAC CCCAGCCGAT GGAAATAGGC GAATGGCACG TCGTATTCCT CTATCTCGAC
CAGAAATCGC AGCGCCTGCT AGCCTCCGCC AAAATCGATA AATTCCTGGA AAACGAACGA
CTGACGGTGC AGGAGGGCGA GGAAGTAAAT CTGCTCGTTT GGCAAAAAAC CGACCTGGGT
TACAATGTGG TCGTAAACCA ATATCACAAG GGCCTTATTT ATGCCAATGA AGTGTTTCAA
CCATTACAAA TAGGCGATTC GATCAAAGGG TATGTTAAAA AGATCCGCGA AGAAAACAAG
CTCGATATCA GCCTGCAAAA AGCTGGCTAC GAGGTGGTAG AACCGGTATC AAAGCAAATC
CTGGAAGAAG TCAAAAAAGG CAGCGGCTTC CTGAACCTAT CCGACAACTC CTCCCCCGAA
GAAATATACA CCCGCCTGAA AATCAGCAAA AAAGTCTTCA AAAAAGCCAT CGGCGGCTTG
TACAAGCAAG GCATTATCCG GATTGAGGAA GACGGGATTT ACCTGGTTTG A
 
Protein sequence
MLFIGKYNYL TIERVTSVGM FLSDVEGEEV LLPNQYITDD MQVGDQIKVF VYLDSEDRPV 
ATTQTPKIIR NEFAFLEVKD VSEYGAFLDW GLIKDLFVPF REQPQPMEIG EWHVVFLYLD
QKSQRLLASA KIDKFLENER LTVQEGEEVN LLVWQKTDLG YNVVVNQYHK GLIYANEVFQ
PLQIGDSIKG YVKKIREENK LDISLQKAGY EVVEPVSKQI LEEVKKGSGF LNLSDNSSPE
EIYTRLKISK KVFKKAIGGL YKQGIIRIEE DGIYLV