| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5031 |
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| Symbol | |
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| ID | 8228637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6083369 |
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| End bp | 6085180 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644932879 |
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| Product | excinuclease ABC, C subunit |
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| Protein accession | YP_003089396 |
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| Protein GI | 255038775 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAT TCAATTATAA AGAAGAACTT GCCAAAATTC CTCTCGATCC CGGCGTGTAC
CGGTATTTCG ATGAAACCGG CGAGGTCATA TATGTAGGAA AAGCAAAGAG CCTGCGCAAC
CGGGTTTCGA GTTATTTTTC CAAAAATAAC CAGCACGATC GCAAGACCAG ACGGCTCGTG
AGCCAGATTC GCCGGATCGA GTATACCATC GTGTTGAGTG AGTGGGACGC ATTGCTGCTG
GAAAATCAGC TGATCAAACA GTTGCAGCCC AAGTTTAACA TCCTTCTCAA AGACGACAAG
ACTTACCCGT TCATTTGTGT GACCGATGAG CCATTCCCGC GCGTGTTCCC GACCCGCAAT
ATGGACCGGA CGAAGGGCAC ATTCTACGGC CCGTTCGCCA ACTTGCGGTC GATGCACACT
TTACTGGATA TGTTCAAGGC ATTGTACCAG ATCCGGTCGT GCCAGTTGCC GCTCAATAAG
TCGAATATCG AGGCGGGAAA GTTTAAAGTG TGCCTCGAAT ACCATATTGG TAACTGCAAA
GGGCCTTGTG AGGGTTTCCA GGGCCAGGAT GAGTACAATG CGGAAATAGA ACAGGTGCAT
AATATCCTGA AAGGCAACCT GTCGTCGCCC CAGCAGTATT TCAAAGAGAA AATGCTGGAA
GCTGCCGAGC AGATGGCTTT TGAAAAAGCC CACGCCTGGA AAACGAAAAT CGAACATTTA
TCGAACTTCC AGAGCAAGGC GACGGTCATT AACCCGCGCA TCGGCAACAT CGATGTGCTC
ACCATCGTTT CCGACGACGA GGCCGCCTAC CTGAACTTCA TGAAGATCAA ACAGGGCTAC
ATGGTGGCCA CGCAGACGCT CGAAGTAAAG AAAAAGCTCG ACGAAAGCGA CCTGGAAATC
CTTGCGATGA TGATTGTCGA AATGCGCTCC ACATACGGTT CGGAGGCCAG GGAGCTGGTT
TCGAACCTGA AACCGGACCT GGATATGCGG CTGGATGTGA CGGTGCCGCA AATCGGCGAC
AAGAAGAAGC TGCTCGATAT GTCCATGAAA AACGTGATGT ATTTCAGAAG GGAACGTACC
GAGCGCCGCG AAGTGGAAGC CTCGGCCACT ACCTCCAAAA AGGACCGTGT GCTCATCCGT
CTCAAAGCCG ATTTGCAGAT CAAAACGCTG CCGCGGCATA TCGAATGTTT TGATAACTCC
AATATCCAGG GCACCAACCC GGTGGCTTCG ATGGTGTGTT TCAAAGACGG GAAGCCTTCT
AAAAAGGATT ACCGGCATTT CAATATCAAA ACCGTGATCG GCCCGAATGA CTTTGCTTCC
ATGAACGAGA TCGTGAGCCG CCGCTACCTC CGGTTGATCG CCGAAGAACA GCCGCTGCCC
GACCTGATCG TGGTCGACGG CGGTAAAGGC CAGCTCGGTG CGGCTTGTGA TGCATTGAAG
AGTCTCGGCA TTTACGGCCA GGTGCCCATT ATCGGCATTG CCAAAAGGTT GGAGGAAATC
TATTTTCCCG AAGATCCGCT GCCATTGTAC ATTGATAAGC GGTCCGAATC CCTGAAACTG
ATCCAGCAAA TCCGCGACGA AGCGCACCGG TTTGCAATCA CCTTCCACCG CGACAAGCGG
AGCAAGGCAA GCCTCGTGAG TGAACTGGAA GGCGTGGTAG GCGTTGGAAA AGTAACCGCC
ACCAAGCTCC TGAAACATTT CGGCTCCGTG CGCGCGATCC GCGAAAGCTC GCTGGAAACG
CTTACGGACC TTGTCGGCCT CGACAGGGCG AAAAAGGTAA GGGCCTATTT CGACACCATT
GCCGGGGTTT AA
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| Protein sequence | MSEFNYKEEL AKIPLDPGVY RYFDETGEVI YVGKAKSLRN RVSSYFSKNN QHDRKTRRLV
SQIRRIEYTI VLSEWDALLL ENQLIKQLQP KFNILLKDDK TYPFICVTDE PFPRVFPTRN
MDRTKGTFYG PFANLRSMHT LLDMFKALYQ IRSCQLPLNK SNIEAGKFKV CLEYHIGNCK
GPCEGFQGQD EYNAEIEQVH NILKGNLSSP QQYFKEKMLE AAEQMAFEKA HAWKTKIEHL
SNFQSKATVI NPRIGNIDVL TIVSDDEAAY LNFMKIKQGY MVATQTLEVK KKLDESDLEI
LAMMIVEMRS TYGSEARELV SNLKPDLDMR LDVTVPQIGD KKKLLDMSMK NVMYFRRERT
ERREVEASAT TSKKDRVLIR LKADLQIKTL PRHIECFDNS NIQGTNPVAS MVCFKDGKPS
KKDYRHFNIK TVIGPNDFAS MNEIVSRRYL RLIAEEQPLP DLIVVDGGKG QLGAACDALK
SLGIYGQVPI IGIAKRLEEI YFPEDPLPLY IDKRSESLKL IQQIRDEAHR FAITFHRDKR
SKASLVSELE GVVGVGKVTA TKLLKHFGSV RAIRESSLET LTDLVGLDRA KKVRAYFDTI
AGV
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