Gene Dfer_4893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4893 
Symbol 
ID8228499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5915881 
End bp5917224 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content52% 
IMG OID644932742 
Productcarbohydrate kinase FGGY 
Protein accessionYP_003089259 
Protein GI255038638 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAA CAGCGGTTTT TGATATTGGC AGGACCAATA AGAAGTATGT ACTTTTCAAC 
GAAAAGTATG ACATCGTTCA CGAGTTTTCA GAATCCCTCC CCGAAACAGT TGACGAAGAC
GGCTTTCCTA CCGAAGATTG TGAATTGTTG ACGAAATGGG TGCAGGACCG CTGGGCCGAA
CTGCTGGCGA ACCCGGAATT CGACATCAAG GCCGTGAACG TAGCCGGTTA CGGGGCGAGC
CTCGTGCATC TCGACGCCGC GAACCGCCCG CTTACCCCGC TGTATTCGTA CCTCAAACCG
TTCCCGGAAG AACTTTTGAA GCAATTTTAC AGCACCTACG GCGACCCTAC GCGTATTTCC
CTGCAAACCG GCTCACCGGC GATGGGTATG CTCAACTCGG GCATGCAGCT GTACTGGCTC
AAACACACCA AACCGGAGAT TTATAGCCAG ATCGCCACCA CTTTGCATTT ACCGCAATAC
ATATTATACC TGCTCACCGG CCGCAAAGTG AGCGATTACA CCTCGCTGGG CTGCCACACC
GCATTGTGGA GCTTCGAAAT GTGGGATTAC CACGAGTGGG TGAAGCAGGA AGGCATCCAT
AAGAAACTTG CGCCCGTGCT GGCGTCGTCG TCGTTCATTT ACCGGCATGG CGACAAGGGC
ATTCAGTCGG GCTTCGGGCT GCACGACAGC TCCTCGGCGC TGATCCCTTA CCGCATGGCT
GTTAAAAAGC CGTTCGTATT GCTTTCGACG GGAACCTGGT GTATCAATTT CAATTCGTTT
GCATCTAAAC CACTGACTTC CTATCAGTTG GAACGCGATT GCATGAATTA CCTTACGCCG
GAAGGCAGCG GTGTTACCGC TTCACGCCTC TTCATGGGTC GTGAGCATGA TTACCAGGTG
GCTCGCATTG TAGAATATTT CAAAGTAGCC CCTGATTTCT ACAAAAATGT AGCTTTCGAC
GAAGCAATCC TGCAACAGGA CACACCGAAA TTCTACACTG CCTGCATGAC CGGCAATGGG
CCTTTCCCCG AACCGAACAC CCAGGAATGG CAGATCAGCG CATTTTCTTC GGCTGAGGCG
GCTTACCACC ATTTGCTGAA AGGCCTCACC GAACTGCTTT TCGTATCGCT GGACCTGGTG
AATATCAAGG ATGTACATGC CATTTACGTC GATGGCGGAT TTGCCCGCAA CGAAATATTC
ACAAAACTCC TGGCAAGGCA CTATCCGAAC CATAAAGTAT ACGTGTCGGA CTTGCCTTAC
GCGACTTCAC TCGGCGCCGC ATTGCACGTG ACACGCCCGC AGACCTACGA GTTCGCTGGT
GAAATCCGTG AAATAAAACC TTGA
 
Protein sequence
MKVTAVFDIG RTNKKYVLFN EKYDIVHEFS ESLPETVDED GFPTEDCELL TKWVQDRWAE 
LLANPEFDIK AVNVAGYGAS LVHLDAANRP LTPLYSYLKP FPEELLKQFY STYGDPTRIS
LQTGSPAMGM LNSGMQLYWL KHTKPEIYSQ IATTLHLPQY ILYLLTGRKV SDYTSLGCHT
ALWSFEMWDY HEWVKQEGIH KKLAPVLASS SFIYRHGDKG IQSGFGLHDS SSALIPYRMA
VKKPFVLLST GTWCINFNSF ASKPLTSYQL ERDCMNYLTP EGSGVTASRL FMGREHDYQV
ARIVEYFKVA PDFYKNVAFD EAILQQDTPK FYTACMTGNG PFPEPNTQEW QISAFSSAEA
AYHHLLKGLT ELLFVSLDLV NIKDVHAIYV DGGFARNEIF TKLLARHYPN HKVYVSDLPY
ATSLGAALHV TRPQTYEFAG EIREIKP