| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4844 |
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| Symbol | |
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| ID | 8228450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5853818 |
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| End bp | 5856199 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644932693 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003089210 |
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| Protein GI | 255038589 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.357668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.239545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAGGA ATTATTTCAA AATCGCCGTC CGGAATCTGG CGAGAAACAA GGTTTTCTCG
TTTATCAACA TCGCCGGGCT TTCCCTTGGA CTGACCTGCT GCATGCTGAT CGTCCTATAC
ACGAAAGACG AGGTCAGTTT CGATCGCTTT CATCGGAACA AGGACCAGCT GTACCGCGTG
ATGGTCACCA GCCTGGATGG TGATGATACC CGCACTTTCG GTAGCACGAA CGCCATTCAC
GGACCCACTT TCAAGCAGGA TATTCCTGAA ATCCGGGAGG TGATCCGGGC GCAGAGCAAT
TCATTTGTTG TTAAAAAAGG GAATGAGATC TTGAAAGAAG ATATGCTGTT CGCCGACGCG
CCGTTTTTTT CGGTATTCTC CATGCCGCTG CTGTCCGGCG ATCCCGCAAC CGTCCTTTCC
GACATTCATT CTATCGTGCT GAGCGAGGAC CTGGCGGAGA AATATTTCGG CACAAAAAAT
GCCGTCGGGA AGACAATGAT GCTCAAAACC GGAGATGACT TCGAGCCATT CATTGTGTCG
GGCGTGGCGA AGCGCTGCCC GCAAAACTCG TCGATCCAGT TTAATGCCGT GCTGCCGTTT
GCATACCAGG AAGCAAAGGG TTGGACGGAC AGCGAATGGA TGGGTTTTTA CATGAATACC
TTTTTGCTAC TGAACGAAAA GGCCGATTTC AATGCGGTAA TCGCTAAAAT GAACCAGGTT
TCTAAAAGCA AGGTAATCGC GGAGCCCGGT AAGGAAAAAG ACTTCAAAAA CCAGGTCGTG
TTTGGACTTA TGCCCTTCCT GGACGTGCAT TTGCAAAGTG CGGGCGACCT TCGTAATGGC
CTCGATCACG GCAGCAGCCC CATTTATTCA TACATTCTGT CGGGGATCGC CATCTTTATT
TTGCTGATCG CCTGCATCAA TTTCGTCAAC CTGACCGTGG CGCGCTCACT CAACCGCTCG
AAGGAAATCG GCGTGCGGAA AGTTGTGGGA AGCCTGCGGA AGCAGCTTAT TTACCAGTTT
CTTGGCGAAT CGTTTCTGCT TTCCTTTCTC GCATTTACCC TGGCTATCGT ATTTACTCAA
ATCGCATTGC CCGTTTTCAA CGAGCTCGCC AACAAGCAGC TGGCGCTGTC GTATTTGCTG
GATACCGGCC TGGTATCGGG CTACGTGGCA CTGTTTGTCT CGACGGCATT GGTTGCGGGA
ATGTATCCGG CACTGGTGTT GTCGGGTTTC AGTCCGGTGC AGACGCTCTA CAACCGTACA
AAGCTGTCGC GGAAGAATTA TCTCACGAAG GGCCTGGTGA TTTTCCAGTT TGCATTATCC
GTTTGCCTCG TGATCGGCAC CATTGTGATC TATTCTCAAT TCCAATATCT GACGAGCAAG
GACTTGGGCT ATAACGATGA AAACGTGCTG ATTTTCAGTG TAGGCCGCGG CGCGCCGGGC
GCCAACCTGA CGGAGGTAAT CCAGAGTGAG CTGAAAAATA CGGCCGGAAT AGCATCGGTG
GCCGCTTTCA ATGGTAATTA CAACGGGACG CGCGCCAAGG TGGGCGAGCA GGAGATGGAC
TTCGGCTACA TTGGCGTGAG CGACGATTTT CTGAAAATCC TGCAAATTCC GGTGCTCAAA
GGCCGGAACT TCTCGAAAAG CTTCTCCACT GACCCCGAAG ATGCGATCGT TGTCAACGAG
GCATTTGTTA AGCGTGCCGG GTTACAGAAT CCGATCGGTC AGGAAGTGAA TTTTGAGTGG
AAAAACAAGA AAATGAAGAT CATCGGCGTG ATTCGCGACT ATCACTATGC TTCATTAAAA
GACACCATTA ACCCGCTGGT GCTCACCCAG GACCCGAAAT ATGGCATCAA TACGATCATC
GCGAAACTGG ATAGCAAGGA CATTCCGGCG ACGATCAGGG CCATTGAAAA GATTTTCAGG
TCGCATGTCA AAAACCAGCC TTTCGAATAC AGGTTTGAAG ACGAGGCCAA TCTGAAACGC
TACGAATCGG AGTCGAAATG GAAACAAATG ATCACACTCG CAGCAGTATT GTCCATTTTC
GTTTCGTGCA TTGGTCTGTT CGGACTTGCC ACTTTCAATG CCGAAATGCG GGTGAAAGAG
ATCGGTATCC GCAAGGTACT CGGGGCTTCG GTGGCGAGCA TTACCACGCT GCTTTCGATG
GATTTCGTCA AACTCGTGCT CATCTCGATC CTCATCGCCT TGCCGATTTC CTACTATGGC
GCCAACTTCT GGTTGCAGGA TTTTCCTTAC CGCATCGCCA TGTCGTGGTC CTACTTCGCC
ATAGCCGCCA TCCTGGCAAT CGCCATCGCA GTCTTCACGG TAAGTTTCCA AAGCATCCGG
GCCGCAATGC TCGATCCGGT AAGGTCGTTG AGGTCGGAGT AA
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| Protein sequence | MLRNYFKIAV RNLARNKVFS FINIAGLSLG LTCCMLIVLY TKDEVSFDRF HRNKDQLYRV
MVTSLDGDDT RTFGSTNAIH GPTFKQDIPE IREVIRAQSN SFVVKKGNEI LKEDMLFADA
PFFSVFSMPL LSGDPATVLS DIHSIVLSED LAEKYFGTKN AVGKTMMLKT GDDFEPFIVS
GVAKRCPQNS SIQFNAVLPF AYQEAKGWTD SEWMGFYMNT FLLLNEKADF NAVIAKMNQV
SKSKVIAEPG KEKDFKNQVV FGLMPFLDVH LQSAGDLRNG LDHGSSPIYS YILSGIAIFI
LLIACINFVN LTVARSLNRS KEIGVRKVVG SLRKQLIYQF LGESFLLSFL AFTLAIVFTQ
IALPVFNELA NKQLALSYLL DTGLVSGYVA LFVSTALVAG MYPALVLSGF SPVQTLYNRT
KLSRKNYLTK GLVIFQFALS VCLVIGTIVI YSQFQYLTSK DLGYNDENVL IFSVGRGAPG
ANLTEVIQSE LKNTAGIASV AAFNGNYNGT RAKVGEQEMD FGYIGVSDDF LKILQIPVLK
GRNFSKSFST DPEDAIVVNE AFVKRAGLQN PIGQEVNFEW KNKKMKIIGV IRDYHYASLK
DTINPLVLTQ DPKYGINTII AKLDSKDIPA TIRAIEKIFR SHVKNQPFEY RFEDEANLKR
YESESKWKQM ITLAAVLSIF VSCIGLFGLA TFNAEMRVKE IGIRKVLGAS VASITTLLSM
DFVKLVLISI LIALPISYYG ANFWLQDFPY RIAMSWSYFA IAAILAIAIA VFTVSFQSIR
AAMLDPVRSL RSE
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