| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4824 |
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| Symbol | |
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| ID | 8228430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5831274 |
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| End bp | 5832614 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932673 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003089190 |
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| Protein GI | 255038569 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGAC TCCGGCATTT CAGTATTATG ATCATGATCA GGATCGCCGT GATTGTCCTG
AGCGTGATCG CCCTCGCCTG GCTGGCGTCC CGGCACACCA ATCAAACCCT GGTTTACGTA
CTGGGGACGA TTTTCATATT CATACAAGGG TCGCTGCTGT ACCAGTACGT GACGAACGTC
AACCGGAAAC TGACCTATTT CCTCGAATCC GTGCGTTATT CGGATTTTAC GATCAATTTC
CGGTCGGACA ATAAAATGGG CCGCACGTTT AAGGAGCTCA ACCAGCAGTT CAACGAAGTG
CTGCTGGCAT TCCGGCAGGC GCGGGCCGAG AAGGAGGCCA ATCTGCAATA CCTCAACACG
ATCGTCCAGC ACATCGGGAC GGGGCTGATC ACATTCGACA GCAACGGGCA GGTGAACCTG
ATCAACAACG CGGCGCTGCG CATGCTGGGC ATTTACCGGC TGCATCAGCT CATTGAACTT
AAAGAAAAGC ACCCGCGCCT TTATGACCTG CTTTCCAACC TCGACAGCGG CGTGCGCGAC
CTCTATCGCA CTCCCAACGA CCAGCCGCTC GCTTTGCAGG CAGCCGCCAT CCAGCTCCGC
GGCATGTGGG TCAAAATTGT GGTTTTGCAA AACATTCAAA CCGAGTTGCA GCAGCAGGAA
ATCGAATCTT GGCAGAACCT TACACGTGTG CTGCGCCACG AGATCATGAA CTCCATGACG
CCCATTGTGT CGCTCGTAGG CACCATGCGG CTCATCGTGA ATGAGGATAT CGAGCGTTCC
ACGAACGACC AGGAAGCGGT AAATGATTTG AAAGAAGCAT TATCCACGCT CGAAAAGCGC
AGCAAAGGCA TGATGCAGTT CGTGAATGCC TACCGCGATT TTACCACATT GCCCAAGCCG
GTATTTGCCA GCATCGGCGT GGCCGAGCTT TTGCAGGAAG TTATACAGTT GCTTCAAACG
GACCTCACGC AATCGGGCGT GCTCTGGAAA CTGTCTGTGA AGCCGGAAAC GCTGACCGTC
AAGGCCGACG CCAGCCAGAT CCAGCAGGTG TTGATCAACC TCATCAAAAA CGCATCCGAG
GCATTCTCGC ACCAGACCGA CCGCCTCATT ACGCTATCGG CCTACCAGGT CGACGGGACG
GTAATGATCG AAGTAGGCGA CAATGGCGAC GGCATCGAGC CCGAAGCTTT GGAGAACATT
TTCATTCCTT TTTACACCAC CAAAAAAACC GGCTCCGGCA TCGGGCTAAG CCTTTCGCGC
CAGATTCTGC AGCAGCATAA CGGGCAGCTC AATGTAGAGT CGCAGGTGGG TAAAGGAACT
GTGTTTACGC TGGTATTTTA G
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| Protein sequence | MIGLRHFSIM IMIRIAVIVL SVIALAWLAS RHTNQTLVYV LGTIFIFIQG SLLYQYVTNV
NRKLTYFLES VRYSDFTINF RSDNKMGRTF KELNQQFNEV LLAFRQARAE KEANLQYLNT
IVQHIGTGLI TFDSNGQVNL INNAALRMLG IYRLHQLIEL KEKHPRLYDL LSNLDSGVRD
LYRTPNDQPL ALQAAAIQLR GMWVKIVVLQ NIQTELQQQE IESWQNLTRV LRHEIMNSMT
PIVSLVGTMR LIVNEDIERS TNDQEAVNDL KEALSTLEKR SKGMMQFVNA YRDFTTLPKP
VFASIGVAEL LQEVIQLLQT DLTQSGVLWK LSVKPETLTV KADASQIQQV LINLIKNASE
AFSHQTDRLI TLSAYQVDGT VMIEVGDNGD GIEPEALENI FIPFYTTKKT GSGIGLSLSR
QILQQHNGQL NVESQVGKGT VFTLVF
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