| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4823 |
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| Symbol | |
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| ID | 8228429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5829549 |
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| End bp | 5831240 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932672 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003089189 |
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| Protein GI | 255038568 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA ATTCTCCTCT TTTCCGAAAA AAATCCGTCG ACCAGATTCT GAAAGATGCC
CATTCGGGAA GCGAGGGAGA GCTTGCCAAA GTGCTCGGTG TCCGCGACCT TGTTTCGCTG
GGCATTGCGG CGATTGTGGG CGCGGGGATA TTCAGCACGA TTGGTCTGGC GAGCTACAAT
GGCGGGCCGG CGGTGTCGCT GCTTTTTGTT TTTACGGCCA TAGCCTGCGT TTTCACGGCG
CTTTCGTATG CACAGTTCGC CAGCACCGTG CCGGTGTCGG GTAGCGCGTA CACCTATGCT
TACGTGGCTT TCGGCGAGCT GTTCGCGTGG ATCATCGGCT GGGCGCTTAT CCTGGAATAT
GCCGTTTCCA ACATGGTAGT GGCCATTTCG TGGTCGGAAT ATTTTGTGAG CATGCTCAAA
GGCTTCGGCA TTTCCTTGCC GGGCTGGCTT ACGATCAACG GCGAATCGGC ACGAGAAGCA
TTTTTGAAAT TACAGAGCTC CGGCATGGCG GAATTGTCTG ATTATGAGCG TTTCGCGGCA
TCGGCATACG CCTCGGCCCC CACGATCGGT GACATGCATA TCCTGCTGAA TTTACCCGCA
GGGCTGATCA CATTGCTCAT CACGGCGTTG GTTTATATCG GAATCAAAGA ATCGCGGACG
GCCAGCAATA TCATGGTGGT GCTGAAAGTG GGCGTGGTGC TGCTGGTAAT CCTGGCCGGG
GCCTTTTATG TGAAGCCGGA AAACTGGTCG CCATTTGCCC CCAACGGCGC GAAAGGGGTG
CTCAGTGGCG TGGCGGCAGT ATTCTTCGCA TTCATCGGTT TCGATTCCAT TTCGACCACC
GCCGAAGAAT GCCGGAACCC GCAGCAGGAT ATGCCGAAAG CGATGATTTA CTGCCTAGTC
ATTTGTACTG TATTATATGT ACTTATCACG CTCGTGCTCA CAGGCATGGT GAACTACACC
GAACTGAAAG TAAGCGACCC GCTGGCATTT GTATTCCAAA AGAACGGGCT CGATTTTATG
GCCGGGGTGA TTTCGGTCAG CTCGGTGATC GCCATCACGA GTGCATTGCT GGTGTACCAG
CTCGGCCAAC CGAGGATCTG GATGACCATG AGCCGAGATG GCCTGCTTTG GAAGCGTTTC
GCCAAAATCC ACCCCAAATA CCGTACGCCG TCCTTCGCGA CGATCATCAC CGGTGTGGTG
GTAGGGATTC CCGCATTGTT TTTCAAAATG GATTTCTTCG TCGATCTCAC GAGCGTGGGT
ACTTTCTTCG CATTCATCCT CGTGTGCGGC GGCGTACTCT ATCTGGATCA CAAGGGCATT
TCGGCCCGCT CCAAATTCCG CGTGCCTTAC ATTAATGGCA AATTCCTCGT AGGAGGTTTG
TTCGCCCTCG CCATTGTGGG CCTGCTTACC TATGGCCAGG AGGTTATTCT TGAATGGCGG
ATGCTGAGTT TTGCGGAGAT TATGGAGCAC AAGCTGCTCA CCATTATTTT CTGGATCACC
TGGTGTACGC TATCGATTTT GAGCTACCAG CATAACTTCT CGTTGCTGCC CGTGGCCGGT
ATCCTCACCA ATTTGTACCT TATGACCGAA CTCGGCGCAT CCAACTGGCT GATTTTCGTG
ATCTGGCTTG CGATTGGGCT TGTGATCTAT TTCAGCTATG GCTACAAGAA GAGTAAGCTG
GCGCAGCAAT AG
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| Protein sequence | MSQNSPLFRK KSVDQILKDA HSGSEGELAK VLGVRDLVSL GIAAIVGAGI FSTIGLASYN
GGPAVSLLFV FTAIACVFTA LSYAQFASTV PVSGSAYTYA YVAFGELFAW IIGWALILEY
AVSNMVVAIS WSEYFVSMLK GFGISLPGWL TINGESAREA FLKLQSSGMA ELSDYERFAA
SAYASAPTIG DMHILLNLPA GLITLLITAL VYIGIKESRT ASNIMVVLKV GVVLLVILAG
AFYVKPENWS PFAPNGAKGV LSGVAAVFFA FIGFDSISTT AEECRNPQQD MPKAMIYCLV
ICTVLYVLIT LVLTGMVNYT ELKVSDPLAF VFQKNGLDFM AGVISVSSVI AITSALLVYQ
LGQPRIWMTM SRDGLLWKRF AKIHPKYRTP SFATIITGVV VGIPALFFKM DFFVDLTSVG
TFFAFILVCG GVLYLDHKGI SARSKFRVPY INGKFLVGGL FALAIVGLLT YGQEVILEWR
MLSFAEIMEH KLLTIIFWIT WCTLSILSYQ HNFSLLPVAG ILTNLYLMTE LGASNWLIFV
IWLAIGLVIY FSYGYKKSKL AQQ
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