| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4809 |
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| Symbol | hslU |
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| ID | 8228415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5815051 |
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| End bp | 5816442 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932658 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_003089175 |
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| Protein GI | 255038554 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAC ACCTTAACCG CCTAACACCG CGTCAGATCG TTTTCGAGCT TGACCAATAT
ATCATCGGAC AAAATGACGC AAAGCGCAAC GTCGCGATCG CGCTGCGGAA CCGGTGGAGG
CGAATGAACA GTCCGGAGGA CATTCAGCGG GAAATTATCC CGAATAACAT ACTGATGATC
GGCGCCACGG GCGTAGGTAA AACCGAAATT GCCCGCCGGC TTGCCAAAAT CGCGGACGCG
CCGTTCGTAA AAGTGGAAGC ATCGAAATTT ACGGAAGTTG GGTATGTGGG CCGCGACGTC
GAAAGCATGG TCCGCGACCT GGTGGAGCAG GCCGTAGGCA TGGTACGCAC GCAGAAAAAG
GAAGAAGTGA AAATCAAGGC GGAACAGGCC GTGGAAGACA TTATCCTTGA TGCATTGATC
CCGCCCGTAC ACGGCTCAGG CGGCACAAGG CCTTTGCCCG ACAATGGCTC CGAAGAAATG
CCTCAGAGCG ATGCCGAACT GAACCAGCGC ACGCGCGAGC GTTTCCGCGA GAAAATCCGC
AATGGCGAAC TCGACAGCCG CAAAATTGAA ATCGAAGTAC AACAGAACCA AATGCCAAAT
GTAGGCATGA TAGGCGGTGC CGTGGACGAC GTTTCTATGA TGAATATCCA GGAAATGATC
GGCAATATGA TGCCGCGCCG TGGTAAAAAG CGCAAAGTGA CCGTGGAAGA AGCGCGTAAG
TTGCTGCTGG ACGAAGAGGC GTCGAAACTG ATCGATATGG ACGAGGTGAA GCTGGAAGCC
ATCAAAAAGG CGGAAAATCT CGGTATCATT TTCATTGACG AGATCGACAA GGTCGCATCC
AGCCGTTCCG GCGGAAGCGG TCCCGATGTG AGCCGCGAAG GCGTGCAGCG CGATTTGCTC
CCAATCGTGG AAGGAAGCTC CGTGAATACC AAACACGGTG TGATCCAGAC TGACCACATC
CTGTTCATCG CCGCAGGCGC ATTCCACGTG TCGAAGCCAT CCGACCTCAT CCCGGAACTT
CAAGGCCGCT TCCCGATCCG TGTGGAGCTT AACAGCCTGA CGGAAGGTGA TTTTTACCAA
ATCCTGAAAG CGCCTAAAAA TGCATTGACG AAGCAATATG GTGCGATGAT GGAAGCGGAA
GGCGTGGAGC TGGATTTCGA AGACGGCGCG CTGCGCGAAA TCGCCCGCAT TGCATTCGAG
GTCAATAGCG AAGTAGAAAA CATCGGTGCC CGCCGCCTGC AAACTGTCAT GAGCTCACTC
CTCAACGACT TCATGTTCGA CATCCCCGAC ATGATCGGCG ACGGCTCGCA AATCACCATC
ACCGCCGAAA TGGTAGAGCA AAAGCTATCC GCACTGGTGA AAAATAGGGA TTTGAGTCAA
TATATACTTT GA
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| Protein sequence | MTEHLNRLTP RQIVFELDQY IIGQNDAKRN VAIALRNRWR RMNSPEDIQR EIIPNNILMI
GATGVGKTEI ARRLAKIADA PFVKVEASKF TEVGYVGRDV ESMVRDLVEQ AVGMVRTQKK
EEVKIKAEQA VEDIILDALI PPVHGSGGTR PLPDNGSEEM PQSDAELNQR TRERFREKIR
NGELDSRKIE IEVQQNQMPN VGMIGGAVDD VSMMNIQEMI GNMMPRRGKK RKVTVEEARK
LLLDEEASKL IDMDEVKLEA IKKAENLGII FIDEIDKVAS SRSGGSGPDV SREGVQRDLL
PIVEGSSVNT KHGVIQTDHI LFIAAGAFHV SKPSDLIPEL QGRFPIRVEL NSLTEGDFYQ
ILKAPKNALT KQYGAMMEAE GVELDFEDGA LREIARIAFE VNSEVENIGA RRLQTVMSSL
LNDFMFDIPD MIGDGSQITI TAEMVEQKLS ALVKNRDLSQ YIL
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