Gene Dfer_4791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4791 
Symbol 
ID8228397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5794024 
End bp5795130 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content54% 
IMG OID644932640 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_003089157 
Protein GI255038536 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0204318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGATCA TCTGCGTGAT GGGTGCCCGC CCGAATTTTA TGAAGGTGGC TGCCCTGTAC 
CGGGCTTTTT CGAAGCATCC GGGGTTTTCG GTAAAGCTGT TGCACACCGG CCAGCATCAC
GACGATGCGA TGTACGGCGT CTTTTTAACA CAGCTCGGTC TTCCGCACCC CGATTTCGCG
CTCGGCATCC ACGGCGGCTC GCATACCGAG CAGACGGCCC GGATCATGCT TGCATTTGAA
AAAATAGTCA AAACGGAGCG CCCCGATGCC GTGCTCGTGG TAGGCGACGT GAATTCGAGC
CTCGCCTGTG CGCTCGTGGC AGCCAAGGAG GGAGTGCTTT TATTTCACGT TGAGGCGGGG
TTGCGGAGCG GCGACAGGAC CATGCCCGAG GAAATCAACC GGCTGCTGAT AGATCGGATT
TCGGACGAAC TGTTCGTATC GGAGGCGGGG GCGATGGCTA ACCTGCTGGA TGAGCACATT
GCGCCTGAGC GGATGCATTT TGTCGGGAAT GTGATGATCG ATACGCTGGC GGCGTGCCGG
GAAAATGCAT TGAATAGGAA TGTATTTGAG CAATTAGGAC TGGTTAACAA AGGCTATGTG
CTGATGACCA TGCACCGCCC CGCCAATGTC GACACCCCCG AAGCCCTGGC CGCGGTAGTG
GAGCTGATAG GCGCTGTCGG CAAGATGCGA AAGGTCGTTT TCCCCCTCCA TCCGCGGACG
AAGGCCAGTC TGGTGCGGAA CGGGATGTTC GAAGAGTTCG AAAAAGCCAG CGGATTGGTC
CTGCTTCCTC CCCAGGGATA TTTCGAGTTC ATCAACCTGA TGGCGCATTC GGCTATGGTT
ATCACGGATT CGGGCGGGAT TCAGGAGGAG ACCACTTTTT TGGGAATACC TTGTGTAACA
TTGCGAAATA ATACGGAACG ACCGGCGACG ATCGGGGAGG GGACCAATTA TCTTGCCGGA
GATTTGGCAG TTGATAAAAC GATAGCACTT GTCGAACGGA TTTTGAGCGG GAATGTAAAG
AAACACGCAC TACCGGTACT GTGGGACGGC CGCGCATCCG CGCGAATCGT TGAAATAATT
GAAAGAAAAT ATTTAGTTAA AATATAG
 
Protein sequence
MKIICVMGAR PNFMKVAALY RAFSKHPGFS VKLLHTGQHH DDAMYGVFLT QLGLPHPDFA 
LGIHGGSHTE QTARIMLAFE KIVKTERPDA VLVVGDVNSS LACALVAAKE GVLLFHVEAG
LRSGDRTMPE EINRLLIDRI SDELFVSEAG AMANLLDEHI APERMHFVGN VMIDTLAACR
ENALNRNVFE QLGLVNKGYV LMTMHRPANV DTPEALAAVV ELIGAVGKMR KVVFPLHPRT
KASLVRNGMF EEFEKASGLV LLPPQGYFEF INLMAHSAMV ITDSGGIQEE TTFLGIPCVT
LRNNTERPAT IGEGTNYLAG DLAVDKTIAL VERILSGNVK KHALPVLWDG RASARIVEII
ERKYLVKI