Gene Dfer_4787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4787 
Symbol 
ID8228393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5789824 
End bp5790732 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content52% 
IMG OID644932636 
ProductMethyltransferase type 11 
Protein accessionYP_003089153 
Protein GI255038532 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0659987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACG AAAAACGAAG CCATGAAGCG CATTCGGAAT GGTTTGAATT GCAGTTTAAT 
ACCCCGGAGG CCAAAGATAA GGTCTTCGAA TTGTGGGAAT ATGATAACCA GCACCAGACC
ATTGCCAACT GGATTCATGA GCGGATGCTC GCGCTGAGTG ACCCGTTCGT GTCGGAGCGC
AAGTCGTGGC TCACGGTAGG TGATGCATAT GGTTTCGATG CCCATCATTT TTACAAAAAG
GGCCTTAACG TGACGGCGAC CGATATTGCC GGGACTTTCC TTCCATTATC CCGGGAGAGA
GGTTTTATCG AGCAATATGC GATCGAGAAT GCCGAACAGC TCTCCTTCGC CGACGGCAGT
TTCGACTATG TGTTCTGCAA GGAGGCCTAC CACCATTTCC CGCGCCCCTA CCTGGGCGTG
TACGAGATGC TGCGCGTTGC GCGCGAGGCC GTGATACTGG TGGAACCCCA CGATCCGATC
TCGAAAATGC CGGCATTGCT GGCGTTGCGG AACATTTTCG ACCGCTTTGA TACCAATGCA
TTGCAGAAAT ACTGGAAAAA CAGGTATTCC TTCGAAACGG TGGGGAATTA CGTATTCAAA
CTATCGGAGC GCGAAATGGA CAAGCTGGCC AATGGAATGG GCCTCCCGGC GGTGGCTTTC
AAGGGGATTA ACAACAGTTA CTATCACGCA TCCTACGGGC GCGAAAAAGC CAACGATTCG
TCGCCTGCAT TCCGGAAGAT CAAGCGCAAG CTCGCCTTTC ATAATTTCCT GGTGAAGGCT
TCGCTGATGC CCTCGCAGCT GCTTTGTGCC GTTATTTTCA AAAAACTGCC GTCCGAACAG
GTTAGGAAAG CCATGGAGCG AGACGGCTTT CAAATACACC TCTTCCCTCC GAACCCGTAC
GCGCATTGA
 
Protein sequence
MSNEKRSHEA HSEWFELQFN TPEAKDKVFE LWEYDNQHQT IANWIHERML ALSDPFVSER 
KSWLTVGDAY GFDAHHFYKK GLNVTATDIA GTFLPLSRER GFIEQYAIEN AEQLSFADGS
FDYVFCKEAY HHFPRPYLGV YEMLRVAREA VILVEPHDPI SKMPALLALR NIFDRFDTNA
LQKYWKNRYS FETVGNYVFK LSEREMDKLA NGMGLPAVAF KGINNSYYHA SYGREKANDS
SPAFRKIKRK LAFHNFLVKA SLMPSQLLCA VIFKKLPSEQ VRKAMERDGF QIHLFPPNPY
AH