Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4771 |
Symbol | |
ID | 8228377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 5770043 |
End bp | 5770756 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644932620 |
Product | secreted protein |
Protein accession | YP_003089137 |
Protein GI | 255038516 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000218877 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACATCC TGACAAAAGT GGCCTGCGGC TGTCTGCTAT GCATTTTGGC ATTCACCAAT GTGCAGGCCC AGAAAAAAGG TTTCGCGTTC GGTATCAAGG GAGGGGTGAA CCTGTCGCGG CTAACCATGG GCGATGTGTT TACGACACGC TATGACGACA GTGGCAATCC ATACCTCGGG TACGATGGTA AAGAGGTGAG AGATAACCTG AAAGAGAGTT TTAATACAAG GACCGGCGCG GTCGGCGGCG TGTGGATGCG CTTCGGGCGG ACGATATTTA TCCAGCCGGA AGTGCTGGTT TCTACAAAAG GCGGATCATT CAAAATAATC CAGAATGACC AGGAAATACC AGTTGAAAAA ACAGTGAACA TCAAATACAG CAATATTGAT GTACCGTTGC TCATCGGTCT GAAAGGCGGG CCGTTCCGCA TTCTCGCGGG GCCGGTAACG TCGTTCCGCA TCGGCGACAA CCAGCGCCTG CGCGATGCAT TCCGTTACTA CACTTCCGAT CTCAACAATG CGATGTCGGA AGCGACATTC GGTTACCAGC TCGGGGCCGG CCTGGATTTG GGCAGTTTCA GTCTCGACGT AAGAAAAGAA GGCTCCTTCA CCAACCTGGC CTCATTTCAG GTAAGCGGCC AACAAGCAGC CGGCGGTTCC GTAAAGCAAA AAGTGAGCAG CTGGCAGGTG ACGCTGGGGT TGAAGTTGTT TTAA
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Protein sequence | MNILTKVACG CLLCILAFTN VQAQKKGFAF GIKGGVNLSR LTMGDVFTTR YDDSGNPYLG YDGKEVRDNL KESFNTRTGA VGGVWMRFGR TIFIQPEVLV STKGGSFKII QNDQEIPVEK TVNIKYSNID VPLLIGLKGG PFRILAGPVT SFRIGDNQRL RDAFRYYTSD LNNAMSEATF GYQLGAGLDL GSFSLDVRKE GSFTNLASFQ VSGQQAAGGS VKQKVSSWQV TLGLKLF
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