Gene Dfer_4739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4739 
Symbol 
ID8228345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5732957 
End bp5734261 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content54% 
IMG OID644932588 
Productvanadium-dependent haloperoxidase family protein 
Protein accessionYP_003089105 
Protein GI255038484 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.406685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACTGT CCCTGAGCTG GGCGGCTTGC ACGAAAAGTG AATCTAATAA GGAAATCAGC 
CCGTCTGTAA TCGGGCAGGT CACGTTGCAA ATGACCGACG TGATGGTACA CGACGTGACA
AATCCGCCGC TGGGTGCGCG CTTCTATTCT TATGCCTGCC TGGCGGGATA TGAAGTGGTT
GCGCTTCATG ACAAAGCGTA CCCAAGCATG CACGGGGTCC TGAACGACTT TCCGGCGATA
GAAAAGCCTC AGGTAGCAGA TTATTCCTAC CAGCTTGCAT CGGCGCTCGC CATCCTTGAA
ACAGCGAAAA AAATGCAGCC TTCGGGCGCA ATGCTTCAAA AGTACCAGCA AACCCTGGTC
GATTCGTGCA AGAAGAACGG TTTTACGGAC GCGGTGATCG CTGGTTCGCA GGAATATGCA
TTGGCGATCA GCAAGCAGAT TTTGAAGTAT GCCAAAGCCG ATCATTACAA CAAGATCAGC
AACTTTCCCC GGTACGAGCC GCATGGCGGG CCGGGCACAT GGTATCCAAC GCCTCCGGGC
TACTTCCCGC CCGTGGAGCC GTATTTCAAA ACGGTACGCC CGTTCACCCT CGATTCGGCA
GCGCAGTTCA GGCCCGCGCC GCCCGTTGCA TTCTCGGAAG CCGAAAATTC GGAGTTTTTC
AAACTCATGA AGCTGAATTA CGACGACGAC CAGTCGGCAC AGGAACACCG GGTGATCGCC
GCATTCTGGG ATTGCAACCC GTTTGCGCTC GAAAATAAAG GACATTTATT GGTAGGCATG
AAGAAAATAT CGCCGGGCGC GCACTGGATG GGCATTACCG ATATTGCGTG CCTGAAAGCC
AAAACGGATT TTTCCAAAAC CATGCTCATC AATACCGCTG TGGCGATCGG CCTGATGGAC
GGTTTCATGG CCTGCTGGGA CGAAAAGTAC CGAAGTAACC GTATCCGCCC CGAAACCGCC
ATCCGCAAGT ACATCGACCC TACCTGGAAG CCATTCCTGC AAACCCCGCC ATTTCCCGAA
TACCTGAGCG GGCATTCGGT GATTTCCACC GCGGCGGCCG TGATCCTGAC GCATTATTTC
GGCGATAACT TCGCTTACAC CGATACGGTC GAGGAACGCT TTAATCTGAA AGCCAGGCCA
TTCAAGTCGT TCATGGCTGC GGCGGAGGAA TCGGGCATGT CGCGTTTTTA CGGAGGCATT
CATTTCATGG ACGCCATCGA AAACGGCCAA AAGCAAGGCC AGCAAGTGGG CCAATGGGTG
GTGCAAAAGC TTGGAAACAA AGCAGTGGCC GTGTCAGGGA AATAA
 
Protein sequence
MLLSLSWAAC TKSESNKEIS PSVIGQVTLQ MTDVMVHDVT NPPLGARFYS YACLAGYEVV 
ALHDKAYPSM HGVLNDFPAI EKPQVADYSY QLASALAILE TAKKMQPSGA MLQKYQQTLV
DSCKKNGFTD AVIAGSQEYA LAISKQILKY AKADHYNKIS NFPRYEPHGG PGTWYPTPPG
YFPPVEPYFK TVRPFTLDSA AQFRPAPPVA FSEAENSEFF KLMKLNYDDD QSAQEHRVIA
AFWDCNPFAL ENKGHLLVGM KKISPGAHWM GITDIACLKA KTDFSKTMLI NTAVAIGLMD
GFMACWDEKY RSNRIRPETA IRKYIDPTWK PFLQTPPFPE YLSGHSVIST AAAVILTHYF
GDNFAYTDTV EERFNLKARP FKSFMAAAEE SGMSRFYGGI HFMDAIENGQ KQGQQVGQWV
VQKLGNKAVA VSGK