Gene Dfer_4738 details

Gene Information

• Locus tag: Dfer_4738
• ID: 8228344
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dyadobacter fermentans DSM 18053
• Kingdom: Bacteria
• Replicon accession: NC_013037
• Strand: +
• Start bp: 5729560
• End bp: 5732943
• Gene Length: 3384 bp
• Protein Length: 1127 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 644932587
• Product: ASPIC/UnbV domain protein
• Protein accession: YP_003089104
• Protein GI: 255038483

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.411918
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGCAAT TATGGCCCTG GAAAGCGGGC AGCATTGTTC TGATCGCTGG ACTGGTACTT 
TCCGGTTGTG ACAAATCCTC CGATTCCACC AAAGACGAAA AGAAAGACGG CCCGGCGCTC 
TTCACGCTCC TGGGCCCGGA AAAGACGAAA ATCGATTTCG CCAATACACT GACCGAAGGT 
TTAAATACCA ACGTATTGAT GTATGAGTAT TTCTATAACG GCGGCGGCGT AGCGGTGGGC 
GACCTGAATG GCGATGGCCT GGAAGACATT TACTTCACCG GGAATATGGT ACCCAACAAG 
CTCTATCTCA ACAAGGGCAG CATGGTGTTC GAGGACATTA CGGCCATTGC GCAGGTAGGC 
GGGCATGAGC GGCCCTGGAA AACGGGCGTT ACCATGGCCG ATGTGAACGG CGATGGTAAG 
CTGGATATTT ACGTTTGCTA CTCCGGCGCG GTGTCGCCCG AGAGCCTCAA AGACCAGCTA 
TTTATCAACA AAGGCAACAA TGCTCAGGGC GTGCCGCAGT TTGAAGAAGT GGCGGAGCAA 
TACGGCCTGG GCGTTTCGAG CAACAGCACA CAAGCGGCAT TTTTTGATTT CGATAAGGAT 
GGGGACCTGG ATATGTTCCT CCTTAACCAC AACCCGAAAG CACTCCCGAT CCTCGACGAA 
GCGAGCACCG CCGATATTCT CAAAAAGGAA GATCCGGTAA CAGGCGTAAG GCTGTTCCGC 
AACGACCCGC AAAACGGCGT GCCGCATTTT ACAGACATTA CCAAAAAAGC GGGCATCCAC 
AGCTCGCAGC TGACCTACGG CCTCGGTATC GGCATTGCCG ACATTAACCA GGACAGCTGG 
CAGGATATGT ACATTTCCAA CGACTATTCG GTCCCCGACT TTTTATATAT CAACAATGGC 
AACGGCACGT TCACCGACGC GCTCGATGCC AGCATCGGCC ACACGTCGCA TTCCTCGATG 
GGTAACGACA TCGCCGACTT CAATAACGAT GGTCTGCCCG ACATTTTTAC GCTCGATATG 
CTGCCCGAGG ATAACCGCCG CCAAAAACTG CTGACGGGCC TGGACAACTA TGAATTGTTT 
GATTTTAATG TCAAAATGGG CTTCCATCAC CAGTATATGC GCAATATGCT GCAACTGAAT 
GAAGGTATCA CCAAAGGCGC CAAACACCCG GTATTCTCCG AAATAGGCCA GCTTTCGGGC 
GTGTCGAATA CCGATTGGAG CTGGGCATCG CTCTTTGCAG ACTATGATAA CGACGGCTGG 
AAAGACCTTT TCATCACAAA CGGCAACCTC CGGGACTTCA CGAATATGGA CTTCGTGAAA 
TTCATGGGCG ATCATTTGAA GCGCATCGAA GGCCAGGTGA AGCGGGAAGA TGTATTGCAG 
CTGGTGTATC AGATGCCTTC TTCCAACATG AAAAACTACC TTTTCCAGAA TAAAAAAGAC 
CTCACTTTTA CCAATGTCGC CGACAGCTGG GGCTTGGGCG AAATCTCCAA CTCAGGCGGA 
GCCGCCTATG CAGACCTTGA TAACGACGGC GACCTCGACC TGATCGTCAA CAATATCAAT 
AAACCCGCAT TCATTTATCA GAATGACGGG GACAAGCATT TGAAGAACAA TTACCTGAAA 
ATCAAGCTGA CCGGAAGCCG CCAGAATACC CTGGGCCTGG GCGCCAAAGT GACCATTTAC 
CAAAAAGGCC AGCACCAGTA CCTCGAACAA ATGCCGACGC GCGGTTACCA ATCCAGCGTG 
TCGCCCGTGC TGCATTTCGG TCTGGGCAAG GACGCGGCCG TGGATTCGCT GGTGGTGACC 
TGGCTGAGCG GCATGCAGGA AAAAGTCATT AATCCCAAAG CAAACACCAC ACTCGCGCTT 
TCGGAAGCGA ACGCAAAAGC AGGCCCGGGT GCCCGCAAAG GAGCGGCGCC GCTGTTTGCT 
CCCGTGGCTT CGCCGGTCGC ATTTAAAGGC CCGATAGTGA AACTGAACGA CTTCAAGCGG 
CAGCCGCTGC TCATTAATCC GCTTTCATTT TCGGGGCCAT GCCTGAGAAA AGGGGATGTA 
AATGGCGATG GGCTGGAAGA TGTATTCATC GGCGCGACGG CCGGAGAGGC TGGTAAACTG 
TACATCCAAC AGAAAAGCGG CGCATTTACG CCCAAGCCAG TGCCGGCGTT TGAAGCCGAC 
AAGCAAAGTG AAGATACCGA CGCATTGTTT TTTGATGCCA ATGGCGACGG TGCATTGGAT 
ATTTTCGTCG CCAGCGGTGG CTATGCGAGC TTCATGCCCG AAGATCCGCT GCTGCAAAGC 
CGCCTCTACC TGAACGACGG CAAAGGGAAT TTTACCAAAG CCGCAGGTGC ATTGCCCGCC 
ATGCTCACCA GCACGAGCTG CGTGCGCTCC GCCGATGTGA ATGGCGACGG TAAGGCCGAC 
CTTTTCGTGG GCGGTCGCGT GATTCCCGGC CGCTATCCCG AGGCGCCGCG GAGCTACCTG 
CTCATCAATG ACGGCCAAGG CAAATTCACC GACCAAACCG CCTCCATTTC GAAGGAACTG 
GAACGCATCG GCCTGGTTAC GGACGCTGCG TGGACGGACC TGAACGGCGA CAAGAAAGCG 
GACCTCATAT TGGTAGGAGA GTGGATGCCG GTTACGGTGC TGATCAACAA CAACGGGAAG 
CTGGAAAACC AGACAACCAC CTATTTTGAC AAACCCTACA ATGGCTGGTG GAACAAAATC 
CTTGTCGAAG ACCTCAATGG CGACGGGAAG GACGACCTCG TGATCGGAAA CATGGGAACC 
AACACCCAAT GCAAAGCGAG CGACGCCGAG CCGGTGGAAA TGGTTTACAA AGACTTCGAC 
GACAACGGCT CCGTTGACCC GATCATGAGT TTTTACATTC AGGGCAAAAG CTATCCGTAC 
GTCACACGAG ACGAGCTTCT GGATCAGATG AGCATCATGC GCACCCGTTT TCAGGATTAC 
AAAAGCTACG CCGATTTGAC GGTCAACGAG ATTTTTACCA AAGAAGAACT CGAAGGCGCG 
AAAGAGCTGA AAGCCACTCA CCTTCAAACA GCCTATTTTG AGCGGAACGC AAATGGCAAG 
TTCACCGAAA AAGCATTGCC GCTGCAAGTG CAGGTCTCTC CGGTGTACAC CATTACTTCG 
CTGGATTACA ATGCCGATGG TAAAAAAGAC CTGCTGCTCT GCGGCAATGT AAGCAAAGCC 
CGGCTTCGTT TCGGGAAATA CGATGCCAAC TACGGCGTAT TGCTGCAAGG CGACGGCAAG 
GGCGGTTTCA CGTACGTCAA CCAGTACAAA TCGGGTTTTG CCTTGAAAGG CGATGTGCGA 
AGCGTGCTGC CGCTGGGAGA TAAACTGCTG TTCGGAATTA ATCAACAGGA AATAAAAGCG 
TATCAAATTG GTAAAGTTCA GTAA 

 

Protein sequence

MKQLWPWKAG SIVLIAGLVL SGCDKSSDST KDEKKDGPAL FTLLGPEKTK IDFANTLTEG 
LNTNVLMYEY FYNGGGVAVG DLNGDGLEDI YFTGNMVPNK LYLNKGSMVF EDITAIAQVG 
GHERPWKTGV TMADVNGDGK LDIYVCYSGA VSPESLKDQL FINKGNNAQG VPQFEEVAEQ 
YGLGVSSNST QAAFFDFDKD GDLDMFLLNH NPKALPILDE ASTADILKKE DPVTGVRLFR 
NDPQNGVPHF TDITKKAGIH SSQLTYGLGI GIADINQDSW QDMYISNDYS VPDFLYINNG 
NGTFTDALDA SIGHTSHSSM GNDIADFNND GLPDIFTLDM LPEDNRRQKL LTGLDNYELF 
DFNVKMGFHH QYMRNMLQLN EGITKGAKHP VFSEIGQLSG VSNTDWSWAS LFADYDNDGW 
KDLFITNGNL RDFTNMDFVK FMGDHLKRIE GQVKREDVLQ LVYQMPSSNM KNYLFQNKKD 
LTFTNVADSW GLGEISNSGG AAYADLDNDG DLDLIVNNIN KPAFIYQNDG DKHLKNNYLK 
IKLTGSRQNT LGLGAKVTIY QKGQHQYLEQ MPTRGYQSSV SPVLHFGLGK DAAVDSLVVT 
WLSGMQEKVI NPKANTTLAL SEANAKAGPG ARKGAAPLFA PVASPVAFKG PIVKLNDFKR 
QPLLINPLSF SGPCLRKGDV NGDGLEDVFI GATAGEAGKL YIQQKSGAFT PKPVPAFEAD 
KQSEDTDALF FDANGDGALD IFVASGGYAS FMPEDPLLQS RLYLNDGKGN FTKAAGALPA 
MLTSTSCVRS ADVNGDGKAD LFVGGRVIPG RYPEAPRSYL LINDGQGKFT DQTASISKEL 
ERIGLVTDAA WTDLNGDKKA DLILVGEWMP VTVLINNNGK LENQTTTYFD KPYNGWWNKI 
LVEDLNGDGK DDLVIGNMGT NTQCKASDAE PVEMVYKDFD DNGSVDPIMS FYIQGKSYPY 
VTRDELLDQM SIMRTRFQDY KSYADLTVNE IFTKEELEGA KELKATHLQT AYFERNANGK 
FTEKALPLQV QVSPVYTITS LDYNADGKKD LLLCGNVSKA RLRFGKYDAN YGVLLQGDGK 
GGFTYVNQYK SGFALKGDVR SVLPLGDKLL FGINQQEIKA YQIGKVQ