| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4736 |
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| Symbol | |
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| ID | 8228342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5724439 |
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| End bp | 5727579 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644932585 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003089102 |
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| Protein GI | 255038481 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.399087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGCAT TCGCCCAGAA CAGCATCAAG GGTAAGATCA AAGACGAACA GGGACAACCG
CTGCCTGGTG TGAGCGTTGT CGTGAAAGGA ACCACAGCAG GTACAGTGAC CGACAATGAG
GGGCTTTATA CAGTTAATGC CGACAAAAAT GCTACGCTTG TTTACTCATT TATCGGTTAC
CTCACGCAGG AAATTTCGGT AGGTGGCAAA AGCATTGTCG ATGTAACCCT CCTCGCCGAT
ACCAAAGCAC TTGAAGAAGT GGTGGTTGTG GGTTATGGTA CTGCTAAAAA AGCAACACTG
ACCGGCTCGG TAACCGCTGT AAAAGGGGCC GAACTGCAAA AAGCGCCTGC GGCCAACTTA
TCCAACACGC TGGGCGGACG CTTGCCCGGT ATTTCGGCGG TACAATCGAG CGGTGAGCCT
GGCTACGATG GCTCGGCGAT CCGTATCCGC GGTACCAACT CACTGGGTAA CAGCAATGCG
CTCATCGTTG TGGATGGTGT GCCCAACCGT TCCGGTGGTT TGGACCGTAT CAACCCGGCC
GATATCGAAA GTATTTCCGT ATTGAAAGAT GCTGCCGCGG CGATCTACGG TTCGCGTGCA
GGTAACGGCG TTATCCTGAT CACCACCAAG CGTGGTAAGT CGGGCAAGCC GCAGCTTTCT
TATGATATGA ACCTCGGTGT GTCGCAGCCA ACGCGTACGC CGGAAATGTC GAACGCAGCT
GAATATGCGA CGATCCGTAA CGAGTTGCAG ATCTATGATA ACCTGCCCGT AGGACAGTGG
CAGGGCGCAT TGCAGGGCTT CAATACGAAT GGCTCTTACA CCAGAACGGA TAACGGCAAC
GTCATCAACG CGGTATTCAA CCCGGATGAT ATGCAGAAAT TCCGTGACGG TTCCGACCCA
TTCCTGCACC CGAACACCGA CTGGTACGGC TCTGTGATCC GCAATTGGGC ACCTCAGCAA
CGCCACAACC TGCAACTCAC AGGTGGCAGC GAAAACATCA AGTACCTTGC ATCTGCGGGC
TACATCAACC AGGATGGTTA CTATGTGAAT TCTGCGACGG GTTACAAGCA ATATGATTTG
CGTTTGAACC TTGACACGAA GATCAACAAA TACGTAACTG CCAATTTGGG TGTGACTTTG
CGTGAAGAAT ACCGCCACTT CCCAAGCGGC GGCAACAGCG CGGGAGCGAT CTTCCGGATG
CTGATGCGTG GTAAACCGAC TGAAATTGCT ATCTGGCCGG ACGGACGTCC TGGTCCTGAC
ATCGAAAACG GTCAGAACCC CGCGGTAATC ACCACCAATA CAACCGGTTA TAACAACGAC
AAGCGGGATT ACATTCAAAC CAACGGTGGT CTGGAAATCC TGATCCCGGG TGTGCCAGGC
TTGAAAGTGA ATGCAATGGC TGCCATCGAT AAGCAGCTGC GTCGTCAGAA AAACTTCGAA
ACGCCGTGGA CATTGTATTT CTGGGATAAA AAGACTTACG AAGCAGACGG CAAAACGCCA
TTCCTGACAG GAACCGTTCG TTCGACATTC AAAGATCCCC GTTTGAGAGA AAGCTCTTCA
CAGGAATTGT CTATCCAGCT GACTGGTCAG GTTTCCTACG AAAAATCAAT CGACGGTCAC
AATTTCAACG TAATGGCCGG TATCCAGCGT GAGAAAGTAG ATGCAGACGG TTTCTTCGCA
TTCCGCCGCT ACTACATCTC CGACGTGGTT GACCAACTCT TCGCGGGTGG TACGCCTGAG
CAGGATATGA ACAACTTCGA TTTGTTCAAA AGAGCACGTT TGAGCTACTT CGGTCGCGCG
GGTTACAACT TCAAGGAAAA ATACCTCGCC GAGTTCCTGT GGCGTGTGGA TGGTTCCTAC
GTATTCCCGA AAAACGGCCG TTTCGGTTTC TTCCCGGGGG TATCGGCCGG ATGGCGTATT
TCGGAAGAAG GGTTCTGGAA AAACAACATT TCGCGCTACG TAAACAATGT GAAGCTGCGC
GGTTCGTGGG GACAAATGGG AGCTGAGCCT TACTTCCTCG GAACGGAAAC ATTGGCTGAG
TACCAGTACC TGTCGACCAT GGGCTTCGGT ACCTACATTA TCAACGACCA GGTGGCTAAA
ACCCTGCTCG AAACCCGCGT AGCCAACCCG AACTTTACCT GGGAAGTGGC GAACAACTCC
AACTTCGGTA TCGAAGGAAC GTTGTTCAAC GACAAGCTGG CATTCGAATT CGACTACTTC
GTAAACAACC GTTCGAAAAT CCTGATCCCG AAAGCAGGCT CAACGCCTTC GTCGGCAGGT
ATCGACGGCA AGCTTCCACC TCAAAACCTT GGTAAGCTGC AAAACAAAGG ATGGGAATTC
AAAGTGAGCT ACGACGGCAA TGCAGGCGAT TTCTCTTACT CTGTGAGCGT GAATGGTGGT
TATGCCAAAA ACAAAATCAA GTACTGGGAT GAAACTCCGG GCGCACCTGT GTACCAGCAG
TCGACCGGCA TGCCTTACGG CTCGTTCCTC GTGTATCAAT TTGATGGCGC ATTCAAAAGC
CAGGAAGAGA TCGACGCCAA CAAAATCGAC TACGGCCCGA TCACCGGTAA CCTTCGTCCG
GGTGACATGA AGTTCAAGGA TGTGAACGGC GACGGCAAAA TCAGCGCTGA CGACCGTATC
CGTTCCGAAA AAGTACAACG CCCATGGTTT ACAGGTGGTG CTTCGGTGAA CCTCGGTTAC
AAGCAGTTTG ATCTTTCATT GTTGTTCCAG GGTACATTGG GCGGTCTTCA GATCGTAGGT
CTGACCGAAT CCGGCGACAT TGGTAACTAC CTGAAATACG ATTTCGACCA CCGCTGGACG
ATCGATAACC CAACCGACAA ATACCCACGT CTGACCAACC GTAACAACCG TTACTACACC
AACACAGGCC AGGCGGGTAT CAACAACTAC TTCCTGAAAA GCAACAACTA CCTGCGTTTG
AAAAACATCG AACTCGGCTA TAACCTGCCT TCGGAAATCG GTTCGAAAAT CGGTTTGAGC
AACCTGAGAA TTTATGTGAA TGGATTGAAC CTGCTGACTT TCGACAAAAT CAAAGTTTGG
GACCCGGAAG CAACCACCAA CAGTGGCCAG TACTATCCAC AAGCAAGAGT TGTCAGCGCA
GGTGTACGTC TAGCATTTTA A
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| Protein sequence | MGAFAQNSIK GKIKDEQGQP LPGVSVVVKG TTAGTVTDNE GLYTVNADKN ATLVYSFIGY
LTQEISVGGK SIVDVTLLAD TKALEEVVVV GYGTAKKATL TGSVTAVKGA ELQKAPAANL
SNTLGGRLPG ISAVQSSGEP GYDGSAIRIR GTNSLGNSNA LIVVDGVPNR SGGLDRINPA
DIESISVLKD AAAAIYGSRA GNGVILITTK RGKSGKPQLS YDMNLGVSQP TRTPEMSNAA
EYATIRNELQ IYDNLPVGQW QGALQGFNTN GSYTRTDNGN VINAVFNPDD MQKFRDGSDP
FLHPNTDWYG SVIRNWAPQQ RHNLQLTGGS ENIKYLASAG YINQDGYYVN SATGYKQYDL
RLNLDTKINK YVTANLGVTL REEYRHFPSG GNSAGAIFRM LMRGKPTEIA IWPDGRPGPD
IENGQNPAVI TTNTTGYNND KRDYIQTNGG LEILIPGVPG LKVNAMAAID KQLRRQKNFE
TPWTLYFWDK KTYEADGKTP FLTGTVRSTF KDPRLRESSS QELSIQLTGQ VSYEKSIDGH
NFNVMAGIQR EKVDADGFFA FRRYYISDVV DQLFAGGTPE QDMNNFDLFK RARLSYFGRA
GYNFKEKYLA EFLWRVDGSY VFPKNGRFGF FPGVSAGWRI SEEGFWKNNI SRYVNNVKLR
GSWGQMGAEP YFLGTETLAE YQYLSTMGFG TYIINDQVAK TLLETRVANP NFTWEVANNS
NFGIEGTLFN DKLAFEFDYF VNNRSKILIP KAGSTPSSAG IDGKLPPQNL GKLQNKGWEF
KVSYDGNAGD FSYSVSVNGG YAKNKIKYWD ETPGAPVYQQ STGMPYGSFL VYQFDGAFKS
QEEIDANKID YGPITGNLRP GDMKFKDVNG DGKISADDRI RSEKVQRPWF TGGASVNLGY
KQFDLSLLFQ GTLGGLQIVG LTESGDIGNY LKYDFDHRWT IDNPTDKYPR LTNRNNRYYT
NTGQAGINNY FLKSNNYLRL KNIELGYNLP SEIGSKIGLS NLRIYVNGLN LLTFDKIKVW
DPEATTNSGQ YYPQARVVSA GVRLAF
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