Gene Dfer_4682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4682 
Symbol 
ID8228288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5646574 
End bp5648232 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content52% 
IMG OID644932531 
Producthypothetical protein 
Protein accessionYP_003089048 
Protein GI255038427 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.646556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGC CGGTCGTGTT TTGGGTAGCC GTGATCCTGT ACTATTCGGT GAATCTGCCC 
TGGTACGACG ATTTCGACCC GTTCCCCGAT TTCCTGCATA AGTGGATCAG CAGCGATGCA
TTGCCGGAAC GGTTGAAACT GCTTTTCCAG CCCAATAACG AACACCGGAT GGTAGTAGGC
AAGCTCGCCA CGCTGCTCTA CTATTGGATT ACCGGGCATC TCAATTTTAC ATTCCTGCAC
ATTGGTGCGG CGCTTTTTAC ATTAGGCACG CTGGCGGTGT TCTGGCGGGC ATTCAGGCGG
TCGGAGCTCA GCGGCTGGTA TTTCCTGCCC ATTCCGTTTT TGTTATTCCA ATTGCAATAT
CACCTCATAT TCCTGTGGGC GATTTGCGGC TGGCAGCATG AGCCGGTGGT GTTTTTCGTG
GTGCTATCCA TGTTTTTGCT TTCGGGAAAG CGCTTCGCTG GAGCATTGCT CGCGGGCGTA
TGCGCCACAT ATGCGATGAG CAGCGGCATT TTCGTGTGGC CGGCGGGCGT GGTGGTGCTG
GTTTTGCGCT CACAATACAA GCAGTTGGCG GCGTGGATCG TGGTGGGCAT TGTGGCGGTT
GGGCTGTATT TCTACGGCAT GTCGGCGCAG GGTAATGAGT CCAGTTTTGC GTTTTTTGCC
AAATATCCGC ACTTGTCGGT GCTCGGCTTT TTTGCATTCC TGGGCGGACT GTTCGATTTC
TTTCCTCAAA AAAGCATCGT CGTGCGCTCC GCATTGCCGG TGTTCATGGC TTTTGTGGCG
ATGATCTGGG TGGTGATCTG GCTTTGGCGG CAGGTTACTC CGTGGCTGGG CAAAACTTTC
GGAATGTTCA AAAACAATCC GGCGCCGCTT CAAAAAGATC ATGCGGGCAA CCTGAGTGCA
TTTTTGGTCG GCATTTTCAG CTTTTTGCTT GTAGAAGCGC TGGTAATCGG GCTTTTGCGG
CCGAGGTTCG GGTTTTTCGT GATGATCGTG AGCAATTACA AAATCTATCC GGCGCTATTC
CTCATTGCTA CCTATTTATC ATTTATCGTT TCAACCCAAA ACCATCACGC GCGCAAGCGT
GCGTGGCAGG CGGCCGCACT GATCAGCCTC GCCATTTGGG GTATATCCAT TTACACCAAC
CTGCCGGTTA TTTCGGAACG CCGGAAATAT TACACGGTAA ATGGCTACAA CCAGCAATTC
AACGGCTTCG GATTGGGTCA CGTGCCCTAT TCGGAAAGCG CGAAATATGT GGATACGCTG
ATGAAGCAGC TTGTGCAAAT GGGTGTTTAC AGTTATCCAA AGGAAGGGCA GGAGCTGGGG
CGGCAGGTGA ATGCACTCAC CACCGCATTT CCCGTTGAAC GTCAGGTTAC GGTGGTGCAC
CGCGAGAAAG GCATTTACGT CAACGACCCG GAAGGCAGGA TTTCGCCCAT CCGCGACCAT
GGTGAATATG CATTCATCCG GAACGCCGAG CGATTGTATT TTTTCAAAAT GGAGCCGCAC
GCCTACACCG GACGCAACTT TTTCAGGCAG TACGACAAAG GTTTCGACAT TGAAATACCG
CATTCATCGC TGCTGCCGGG TACGTACGAT CTCGGTATCG TGAATGTGGA AGGAAGCGCT
TTGAAGGGTG GCATTCTTGG AAAAGTGACA ATACCTTAA
 
Protein sequence
MALPVVFWVA VILYYSVNLP WYDDFDPFPD FLHKWISSDA LPERLKLLFQ PNNEHRMVVG 
KLATLLYYWI TGHLNFTFLH IGAALFTLGT LAVFWRAFRR SELSGWYFLP IPFLLFQLQY
HLIFLWAICG WQHEPVVFFV VLSMFLLSGK RFAGALLAGV CATYAMSSGI FVWPAGVVVL
VLRSQYKQLA AWIVVGIVAV GLYFYGMSAQ GNESSFAFFA KYPHLSVLGF FAFLGGLFDF
FPQKSIVVRS ALPVFMAFVA MIWVVIWLWR QVTPWLGKTF GMFKNNPAPL QKDHAGNLSA
FLVGIFSFLL VEALVIGLLR PRFGFFVMIV SNYKIYPALF LIATYLSFIV STQNHHARKR
AWQAAALISL AIWGISIYTN LPVISERRKY YTVNGYNQQF NGFGLGHVPY SESAKYVDTL
MKQLVQMGVY SYPKEGQELG RQVNALTTAF PVERQVTVVH REKGIYVNDP EGRISPIRDH
GEYAFIRNAE RLYFFKMEPH AYTGRNFFRQ YDKGFDIEIP HSSLLPGTYD LGIVNVEGSA
LKGGILGKVT IP