Gene Dfer_4675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4675 
Symbol 
ID8228281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5638089 
End bp5638607 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content52% 
IMG OID644932524 
Productphosphoribosyltransferase 
Protein accessionYP_003089041 
Protein GI255038420 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.599602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA ACAACACGGT ATCCAGGCGT CAGATTTTGA GCGCGCACCA GACGAGCCAG 
AAAATACGCC GGATCGCTTT TGAAATATAC GAACAGAATT TTGAGGAAAA AGGCATTATC
ATAGCCGGAA TTGCCGGAGA AGGTTTCGCT TTTGCCAAAC GCCTTACCGC TGAATTGACG
GAAATTTCCC CGCTCGACGC TCAGCTGATC GAATTGCGCT TCGACAAAAA CATTCACCAG
CAAAGCCCGA TCCTGTTTGA CCGCGACCTG AACGTGGAAA ACCAGGTCGT GATCGTCGCC
GACGACGTGC TCAACACGGG CCGCACCCTC GCATTCGCAT TGGAGCCATT CCTGAAAGTA
CCTATGAAAA AGGTGCAGGT AGCTGTGATC GTTGACCGCA GCCATCACAA ATTTCCCGTC
CACGCCGATT ACGTGGGGTA TTCGTTGAGC ACCACGCTCA CCGAGCATGT GGAAGTTGTA
TTGAGCCGCG AGACAGAGGA AGGGGTGTAT TTGAAGTAA
 
Protein sequence
MTENNTVSRR QILSAHQTSQ KIRRIAFEIY EQNFEEKGII IAGIAGEGFA FAKRLTAELT 
EISPLDAQLI ELRFDKNIHQ QSPILFDRDL NVENQVVIVA DDVLNTGRTL AFALEPFLKV
PMKKVQVAVI VDRSHHKFPV HADYVGYSLS TTLTEHVEVV LSRETEEGVY LK