Gene Dfer_4674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4674 
Symbol 
ID8228280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5637324 
End bp5638028 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content53% 
IMG OID644932523 
Productamidotransferase, putative 
Protein accessionYP_003089040 
Protein GI255038419 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.623837 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAG TCGGTTTACT GGAATGTGAC CATGTGCGCG AGGAACTGCT GCCGATTGCG 
GGCGATTATC GCGAGATGTT TCCAGCCTTG TTTGCACAGG TGGCGCCGGA GTGGGAGTTT
ACATTTTATG ATGTGTGCAA CGGACATTTT CCGCGGTCGG TGGGTGAATG CGAGGTGTAT
GTTTGCACGG GGTCCAAATC TTCGGTTTAC GACGATGAGC CTTGGATTGA GCAGTTGAAA
GGTTTTGTGA AGGAAATTCA CGATGCCGGC AAAAAATACC TGGGCGTTTG TTTCGGGCAC
CAGATGCTGG CGGAGGCTTT GGGCGGGAAG GTGCAGAAAT CGGCCGTGGG TTGGTGTGTG
GGCGTGCATA ACTTTCAGGT TTTGAATCTC GAAGAATGGA TGGTGCCGGC CCGCCCGTCG
TTTAATCTGC TGATGATGTG CCAGGACCAG GTCATCGAAT TGCCGCCTGA CAGCACATTA
CTTGCCGAAA CGCAGGATTG CCCCGTTAGC ATGTTCCGGG TGGGCGAAAA TATGGTCGGC
ATACAGGCTC ATCCCGAGTT TCCGAAGCCC TATGAAAAGG CATTGATGGA AATCCGCACG
GAGCGGATCG GTGCCGCGAA GGTTGAAATG GGCATTGTGA GCCTCGAACT GCCGCTGCAC
GAGTTGACTT TTGCGAATTG GTTAAAGAAC TTCGCGGCGC TATGA
 
Protein sequence
MTKVGLLECD HVREELLPIA GDYREMFPAL FAQVAPEWEF TFYDVCNGHF PRSVGECEVY 
VCTGSKSSVY DDEPWIEQLK GFVKEIHDAG KKYLGVCFGH QMLAEALGGK VQKSAVGWCV
GVHNFQVLNL EEWMVPARPS FNLLMMCQDQ VIELPPDSTL LAETQDCPVS MFRVGENMVG
IQAHPEFPKP YEKALMEIRT ERIGAAKVEM GIVSLELPLH ELTFANWLKN FAAL