Gene Dfer_4657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4657 
Symbol 
ID8228263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5621179 
End bp5621712 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content51% 
IMG OID644932506 
Product5 nucleotidase deoxy cytosolic type C 
Protein accessionYP_003089023 
Protein GI255038402 
COG category[S] Function unknown 
COG ID[COG4502] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00821968 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.655904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA CGATTGCGGT AGATATGGAC AATGTCATCG TCGACATTGA AGCGAATTGG 
ATCAACTGGT ATGCCGAGGC TTTTGGCGTA ACGGTCACGA AGGAGGCAAT GCATGGCATC
CCGGAAGACC AGGCCTTTCC CGACCCGCTG GCGGCCCGGA GCCTGCTCTA CAAACCAGGG
TTCTTCCGCA ACGCGCCTGT AATGCCCGGC GCACAGGAAG CAATTATCAA ATTACAGGAA
AACTACGAAG TGTACATCGT GTCGGCCGCT ATGGAATTCC CCAACTCCCT GCCCGAAAAG
TACGACTGGC TAGCCGAGCA TTTCCCAAGC ATCACCTGGC GAAATATCAT TTTCTGCGGC
GACAAAAGCG TGATCAACAC CGACTATCTC ATTGACGATC ATTTAAAAAA CCTGGATTTT
CATAAAGGCA AGCCTATTCT GTTCACCGCC GGGCATAACA GGGGAATTGA TAAGCATACG
CGGGTGAATA GTTGGGAAGA GGTGTTGGAG CTGCTCACTT CGGAACTTGT GTAA
 
Protein sequence
MKKTIAVDMD NVIVDIEANW INWYAEAFGV TVTKEAMHGI PEDQAFPDPL AARSLLYKPG 
FFRNAPVMPG AQEAIIKLQE NYEVYIVSAA MEFPNSLPEK YDWLAEHFPS ITWRNIIFCG
DKSVINTDYL IDDHLKNLDF HKGKPILFTA GHNRGIDKHT RVNSWEEVLE LLTSELV