| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4642 |
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| Symbol | |
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| ID | 8228248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5607045 |
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| End bp | 5608196 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644932491 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003089008 |
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| Protein GI | 255038387 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.195012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATT TAAAATGGCC GCTCCTTTTG CTCATAAGCG TTTTCGCATA CGGCTGCGCT
TCCAAAAGTG AGACGCTATC GGAGTCGAAA GACAGTGTTC CGACCATCCC CGTAACGGAA
CTCAGGCCCC AAAAAACCTC ATTGCACCGC GAGTACGTGG GCGACATCCA TGCCGTGCGG
AACGTAGAGA TCTATGCCCG CGTGAAGGGA TACCTCGAAG AAATATATGT GGATGAAGGT
AAGGAGGTAA AAAAAGGCCA GACGCTCTTC CGGATCAATA ACGAAGAATA CGAAGCGCAA
CTCGCCAAGG CCAAAGCGAA CCTGCAAAGC GCCATTGCCG AAGCCAAAGG TGCCGAGCTG
GAAGTGAAGC GGGTGAAATT ACTGGTTGAT AAAAATGTCG TTTCCAAAAC CGAACTCGAC
GTGGCGCAGG CCAAGCTCGC AGCGGCCAAT GCGAAAATAG AGGAAGCCAA ATCCGAGAAA
TCGAATGCGG CTATTCAGCT CGCTTACACG GTAATCCGCG CGCCTTTCGA CGGCGTCGTC
GACCGTCTTC CGCACAAAAT GGGCAGCCTC ATCGACGAAG GAACATTGCT CACGACGCTG
TCGGACACCA AAACGGTGTA TGCTTATTTC AATGTTTCTG AAAACGAATA CCTGGAATAC
ATTAAAACAA GAGGAAATGC GGCCACTAAA AACGCGGTCG TAGAGCTTGA ACTTGCAGAT
GGCTCCTTTT TCAAACACAA AGGAACCATT GAAACCATGG AAGGTGCATT CGACGAAGGA
ACAGGCTCCA TCGCATTCCG CGCACGCTTT TCGAACCCTG AAAAACTGCT GAAACACGGT
TCAACCGGAA CGATCCGCCT GACCAACACG GTGGAAAATG CAATCCTGAT CCCGCAGAAA
GCGGCGTTCG AGATTCAGGA TAAGAACTTT GTGTATGTAT TGGGCAAAGA CAATAAGGTC
AAAACCCGCA GTTTCGTACC GCAGTCGCGG CTATCTACTT TTTACGTGGT GAAATCGGGC
CTCGAACCCG GAGAAACGAT CGTTTACGAA GGTCTTCAAT CATTGCGGGA TGGTGCTACC
ATCAATCCCA AGAATGTAAC GGTTGACAGC ACCGACGTAC CGACCGAAAA AATCGAGCTT
ACCTCGCGGT AG
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| Protein sequence | MKNLKWPLLL LISVFAYGCA SKSETLSESK DSVPTIPVTE LRPQKTSLHR EYVGDIHAVR
NVEIYARVKG YLEEIYVDEG KEVKKGQTLF RINNEEYEAQ LAKAKANLQS AIAEAKGAEL
EVKRVKLLVD KNVVSKTELD VAQAKLAAAN AKIEEAKSEK SNAAIQLAYT VIRAPFDGVV
DRLPHKMGSL IDEGTLLTTL SDTKTVYAYF NVSENEYLEY IKTRGNAATK NAVVELELAD
GSFFKHKGTI ETMEGAFDEG TGSIAFRARF SNPEKLLKHG STGTIRLTNT VENAILIPQK
AAFEIQDKNF VYVLGKDNKV KTRSFVPQSR LSTFYVVKSG LEPGETIVYE GLQSLRDGAT
INPKNVTVDS TDVPTEKIEL TSR
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