| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4573 |
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| Symbol | |
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| ID | 8228176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5517326 |
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| End bp | 5518570 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644932419 |
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| Product | Sigma 54 interacting domain protein |
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| Protein accession | YP_003088939 |
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| Protein GI | 255038318 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAAG TAAGTTGTTC GTTCTGCGGA CGTAAGAAAA GCGAAGTGGA TTTGCTTCTT
TCCGGGATAG ACGCTCACAT TTGTAACCAC TGCATTGCCC AGGGGCACCA GGTAGTTACC
GAAGAGCTGG GACCGAAGGA GGACAAGAAA GAAAAGAAAT CGAAACTTCC GAAACTGAAA
CCCATTCCTC CCGCTGAAAT CAAGCATTTC CTCGAACAAT ATGTCATCGG CCAGGATGAA
GCGAAACGCT CGCTGGCGGT GGCTGTATAT AATCACTATA AACGTCTCAA CCAGGCTGCG
ACCGAGGACG ACGTTGTGAT CGAGAAGTCC AACATTATCA TGGTAGGCGA AACCGGTACC
GGCAAAACTT ACCTCGCGAA ATCCATCGCG CGCATTCTCC AAGTTCCATT CTGCGTGGCC
GATGCCACCG TGGTAACCGA AGCCGGTTAT GTGGGTGAAG ATGTGGAAAC CATCCTGACC
CGCCTGCTGC AAGCGGCAGA CTATAATGTG GAAGCGGCGG AACGCGGTAT CGTTTATATT
GATGAGATCG ATAAAATTGC CCGTAAGTCG GACAACCCGT CCATTACCCG CGATGTGAGC
GGCGAAGGTG TACAGCAGGC ATTGCTGAAA CTCCTCGAAG GCTCAATCGT GAACGTGCCG
CCGCAAGGAG GCCGCAAGCA TCCCGACCAG AAGATGATTT CTTTGAATAC CGAAAACATC
CTCTTCATCT GCGGTGGTGC ATTCGACGGC ATCGAGCGCC ACATCGGAAA GCGGATCAAC
ACCCGTCCGA TCGGTTTCAA TGGAGATAAC CGCATTATCG AGATTTTTGA TAAGGGTAAT
TTAATGCGCT ACGTGACTGC CATGGACCTT AAATCATTCG GACTAATCCC CGAGCTGATC
GGCCGCTTGC CCGTACTCAC GCATTTGAAC CCGCTGGACC GCGAGACATT GCGTCGCATT
CTCACCGAGC CTAAAAACGC ATTGGTACGC CAGTACAGCA AATTGTTCGC CATGGAAGGC
ATCACCCTGC ATTTCGAAGA TGCGGTACTC GATTACATCG TGGACCAGGC GATGATCTAC
AAACTCGGCG CCCGCGGCCT GCGCGCGATC TGCGAGTCGA TCATGACCGA CGCGATGTTC
GATCTGCCGT CGCAGAAGGA GGTGAAGGAA TTCACCCTCT CGCTCGACTA TGCGAAAGAT
AAATTCGAAA AATCTTCGAT GGCATTGCTG CGCTCAGTGG CCTAG
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| Protein sequence | MAQVSCSFCG RKKSEVDLLL SGIDAHICNH CIAQGHQVVT EELGPKEDKK EKKSKLPKLK
PIPPAEIKHF LEQYVIGQDE AKRSLAVAVY NHYKRLNQAA TEDDVVIEKS NIIMVGETGT
GKTYLAKSIA RILQVPFCVA DATVVTEAGY VGEDVETILT RLLQAADYNV EAAERGIVYI
DEIDKIARKS DNPSITRDVS GEGVQQALLK LLEGSIVNVP PQGGRKHPDQ KMISLNTENI
LFICGGAFDG IERHIGKRIN TRPIGFNGDN RIIEIFDKGN LMRYVTAMDL KSFGLIPELI
GRLPVLTHLN PLDRETLRRI LTEPKNALVR QYSKLFAMEG ITLHFEDAVL DYIVDQAMIY
KLGARGLRAI CESIMTDAMF DLPSQKEVKE FTLSLDYAKD KFEKSSMALL RSVA
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