| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4572 |
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| Symbol | |
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| ID | 8228175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5516523 |
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| End bp | 5517215 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644932418 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003088938 |
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| Protein GI | 255038317 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCT GGCTTAACAA TAAATCAATC GTCATCATCG GAGGAACCAC CGGCGCGGGC
CTTTCTGCGG CCCAGGCCTT TGTCCGGCAT GGCGCGAACG TGGTGGTAGT GGGGCGCAAC
CCGGAGAGCT GTCTGCTGGC GGAACTGAAC CTGGGAAGCA ATGCAAGAGC CAAACGGGGA
GATGCCACGC AGCCGCAAAT GGCACTGGAC GCCATTCAGC TGTGCATCCG GGAATTCGGA
AGTTTCGATG CATTATATCA CGTGCCTGAG GAAACCGGCG AACCGGTAGC GGATGCGCCG
CTGCACGACC TCACGATGGA AGGCTGGCGA AAAACACTCG ACCATAACCT CACGTCACTC
ATGCTGTCAA ACCAGGCGGC CGTGCGCACT TTCATGGGCA TGAACAAAGG CGGAAGCATC
CTGAACCTCT GCCCCGACGT TCCGTCCAAC GATCAAAACC AGGCCGGCCA GGGTGCCGCA
ACTGCCAAAG CAGCCATTCT GGGCTTTTCA AAATCCGCTG CTGCCGCATA TGCGCCCTAC
GAAATCCGCA TTAATGTAAT CTCCGCCGAC ACCTCGGCCG TAGCTGACCT GGATGGAGCG
GCGGTATATC TGCTATCCGA TCACGCCCGG TTCACCAACG GACAAGTGCT CGTGATCGAT
GGCGGCCGGA GTGTTTTGGA AGAACAATAT TAG
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| Protein sequence | METWLNNKSI VIIGGTTGAG LSAAQAFVRH GANVVVVGRN PESCLLAELN LGSNARAKRG
DATQPQMALD AIQLCIREFG SFDALYHVPE ETGEPVADAP LHDLTMEGWR KTLDHNLTSL
MLSNQAAVRT FMGMNKGGSI LNLCPDVPSN DQNQAGQGAA TAKAAILGFS KSAAAAYAPY
EIRINVISAD TSAVADLDGA AVYLLSDHAR FTNGQVLVID GGRSVLEEQY
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