| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4550 |
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| Symbol | gcvT |
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| ID | 8228153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5493003 |
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| End bp | 5494085 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644932396 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | YP_003088916 |
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| Protein GI | 255038295 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein
[TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.669623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAG TCCCTTTACA TCAGCTCCAT ATCCGCCTGG GCGCAAAAAT GGTCCCGTTT
GCAGGTTTTG AAATGCCTGT CCGTTACTCG TCGGATCTGG ATGAACACCA CACCGTAAGG
AATGCCGTGG GTGTTTTTGA TGTATCCCAC ATGGGCGAAT TCAGTGTAAA AGGGCCTGGT
GCGCTGGCTT TGATCCAGAA AGTTTCGGCT AACGACGCAT CGGCGCTGTA TGACGGAAAA
GTGCAATACA GCTACCTGCC CAACGCAACG GGAGGCGTAG TGGACGACCT GCTCGTTTAC
CGTATTGCCG AGGACGATTA TTTTCTGGTA GTAAATGCGT CGAACATCGA GAAGGACTGG
AACTGGATCC AGAGCCAGAA TACCGAAGGC GCAGCCATGG AAAACCTGTC CGATTCCCTT
TGCCTGCTGG CCGTGCAAGG ACCGAAAGCG ACAGCCGCGT TGCAAAAACT CACCGATGTG
AACTTATCCT CAATGGAGTA TTACACCTTC AAAATCGGCG AAATGGCGGG TATTAAAGAT
GTGATCATTT CCGCGACGGG CTACACCGGC GCAGGCGGTT TTGAAATATA TGTCAAAAAT
GAGGATGCCG AAAAAATGTG GGATGCCGTT TTCGAAGCGG GCGCCGAGTT CGGTATCAAA
CCTGTGGGCC TGGGTGCACG TGATACATTG CGACTGGAAA AGGCATTCTG CCTGTACGGC
AACGACATCG ACGATGAAAC GTCGCCATTG GAAGCCGGCC TTGGCTGGGT GACCAAATTC
ACGAAGGATT TCATCAATTC CGAAGCATTG AAATCGCAAA AGGAAGCCGG GTTGAAACGC
AAACTGATTG GCTTCGAAAT GATCGATCGC GGCATTCCGC GCGGGCATTA CGAGCTTTGC
GACGCCGAAG GCAACAAACT CGGCGAGGTA ACCTCCGGTA CACAATCACC TACCTTGCAG
AAGGGCATCG GCCTGGGTTA CGTGCCGATG GAGTTCAGCA AAACCGGTAC CGAAATTTTC
GTAAAAGTGC GCGACAGGCT GTTAAAAGCA CAGATTGTAA AAACGCCATT TGTTAAAAAT
TAA
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| Protein sequence | MKTVPLHQLH IRLGAKMVPF AGFEMPVRYS SDLDEHHTVR NAVGVFDVSH MGEFSVKGPG
ALALIQKVSA NDASALYDGK VQYSYLPNAT GGVVDDLLVY RIAEDDYFLV VNASNIEKDW
NWIQSQNTEG AAMENLSDSL CLLAVQGPKA TAALQKLTDV NLSSMEYYTF KIGEMAGIKD
VIISATGYTG AGGFEIYVKN EDAEKMWDAV FEAGAEFGIK PVGLGARDTL RLEKAFCLYG
NDIDDETSPL EAGLGWVTKF TKDFINSEAL KSQKEAGLKR KLIGFEMIDR GIPRGHYELC
DAEGNKLGEV TSGTQSPTLQ KGIGLGYVPM EFSKTGTEIF VKVRDRLLKA QIVKTPFVKN
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