Gene Dfer_4529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4529 
Symbol 
ID8228132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5463566 
End bp5464117 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content49% 
IMG OID644932375 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003088895 
Protein GI255038274 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0212666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.777372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAATA GACTGTTATC GGTGGGATCG GAATTCCCTG AATTCAAAAA GACATCCGTA 
GTATCTCTTG AAAAAGGAAA CGAATTCTAC GATATTACCT CGGAAGACCA CAAAAACGCT
GGCAAGTGGA TGGTCATGTT CTGGTGGCCG AAAGACTTCA CTTTCGTATG CCCTACCGAG
ATTGCAGAGT TCAACAAACA CACCGGCGAC TTCGCTGACC GTGACACGAT CCTGATCGGT
GCTTCTACCG ACAGCGAGTA CGTGCACCTG GCATGGCGCA AAAACCACGA CGACCTGCGC
GACCTGCAAT TCCCGATGCT GGCCGACACT TCGAAATCAT TGGCAGAAGA GCTGGGTATC
CTCGAAGCAA ACGAAAAAAT CGCTTACCGC GTAACATACA TCGTTGATCC ACAAGGCATC
ATTCGTTGGG TAAGTGTTAA CGACCTTTCA GTAGGCCGTA ACGTATCGGA AGTATTGCGC
GTACTCGATG CGTTGCAAAC TGACGAGCTT TGCCCTTGCA ACTGGCAAAA AGGCGAGGCT
ACTCTCGCTT AA
 
Protein sequence
MANRLLSVGS EFPEFKKTSV VSLEKGNEFY DITSEDHKNA GKWMVMFWWP KDFTFVCPTE 
IAEFNKHTGD FADRDTILIG ASTDSEYVHL AWRKNHDDLR DLQFPMLADT SKSLAEELGI
LEANEKIAYR VTYIVDPQGI IRWVSVNDLS VGRNVSEVLR VLDALQTDEL CPCNWQKGEA
TLA