| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4392 |
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| Symbol | |
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| ID | 8227995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5306436 |
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| End bp | 5307158 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932239 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_003088759 |
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| Protein GI | 255038138 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000433749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCAAT CCAGAAATCC AGCGCCTTAC CTACTTTTAA GCATACTCCT TATCATCATT
GATCAGGCTT CCAAACTTCT GGTTCATAAA TACATGCAAC CCGGCTTTTC GGGGCAGATC
GCGCTCATCG GGGATTGGCT GAAACTGCAT TATGTGCTCA ATCCCGGCAT GGCTTTCGGC
ATGCAGCTGG GCCATGAATA TGGTAAATTG TTCCTGACAT TGTTCCGCCT CGTGGCGATG
GTCGCGATTG GCGGCTATAT GATCCACCTT GCCCGCGCCG GGGCTTCCAA AGGGCTGCTT
TGGGCATTAG CGATGATACT CGCCGGCGCG GTCGGCAACG TGATCGACAG TACATTCTAC
GGCGTGTTCC TCGGCAATGC CCCCTATGGC TCTCCCACCC CGTGGTTTCA CGGCCAGGTG
ATCGACATGA TTTTCGTCGA TTTCTGGGAA GGTTTCATTC CCGACTGGGT GCCGATATGG
GGCGGACAGT ATTACTCGAC CCCGATCTTC AACATTGCCG ATTCCTGCAT TTTCCTCGGC
GTGTGCAGCA TCCTGATCTT CCAGGGAAGT TTCCAGTCAC ATGCTCCTGA GCCGGAGGAA
GGAGAACATG AAGAAAAGGA GGATGGAGAA AGAAAGGACG GAGAGATCGA GGATGGAGAA
AAGCGCGACG ACACGCCTGC TGCTGCTAGC GAAGAGGACG ATAACAAAAA AGAGAGCATC
TAG
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| Protein sequence | MNQSRNPAPY LLLSILLIII DQASKLLVHK YMQPGFSGQI ALIGDWLKLH YVLNPGMAFG
MQLGHEYGKL FLTLFRLVAM VAIGGYMIHL ARAGASKGLL WALAMILAGA VGNVIDSTFY
GVFLGNAPYG SPTPWFHGQV IDMIFVDFWE GFIPDWVPIW GGQYYSTPIF NIADSCIFLG
VCSILIFQGS FQSHAPEPEE GEHEEKEDGE RKDGEIEDGE KRDDTPAAAS EEDDNKKESI
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