| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4275 |
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| Symbol | |
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| ID | 8227878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5180138 |
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| End bp | 5181562 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644932122 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003088642 |
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| Protein GI | 255038021 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACAAG AAAACACTTC TTTCAAGCCC TCACTGGGAC TTGTTGACGC CACGATGCTC
GTTGCCGGCA GTATGATCGG ATCGGGCATT TTTATTGTCA GCGCCGACAT CATGCGCAAT
ACTGGTAGCG TGGGCTGGCT GATGTTCGTG TGGCTCATCA CTGGTTTCAT GACGCTCACG
GCCGCATTGA GTTACGGCGA GCTCAGCGCC ATGTTTCCCA AAGCGGGCGG CCAGTACATT
TATTTGAAAG AAGCATATAA TCCATTAATC GGTTTTCTGT ACGGTTGGAG CTTTTTTACG
GTAATCCAAA CCGCCACCAT TGCCGCCGTG GCTGTGGCGT TTGCGAAGTT TACGGCCTAC
CTTGTTCCGG CATTCAGTGA AGATTTAGTC GCGCTGGACC TTGGCTTTCT TAAAATAAGT
CCCGCGCAGC TACTGTCTAT TGTCGTGATT GTGCTGCTGA CGTTTACGAA TACACGTGGT
GTCAACAGCG GTAAAATAAT CCAGACTACA TTCACATTAA CAAAGCTCCT GAGCTTGCTC
GGCCTGATCG TTTTCGGGTT AATTTTCATG AAGCCCGAAG TGTGGGCGGC CAACTGGGGT
GAAGGCATGT GGGATTTGCA CAAACTCAGC CCCGACGGCA GCATTGCGTC GTACACCACC
ATTGCCGCAT TCGGTGCCAT TGCCGCTTCG ATGGTCGGCT CCATTTTTAG CTCCGATTCG
TGGAATAACG TAACGTTCAT CGCCGGCGAA ATCAAAAACC CGCAACGCAA TATCGGCCTC
AGCCTCGCAT TGGGGACGAT TATCGTAACA GTGATTTACG TACTCACCAA CGTCATGTAC
ACCGGCGTGC TCTCGTTGCA GGAAATTGCG GCTTCCGACA AGGACCGTGT GGCGGTAACC
GCCTCCCACG TCATTTTCGG TAATTCCGGC ACGATCGTAA TCGCGGTCAT GATCATGATT
TCGACCTTCG GCTGCGACAA CGGCCTCATT ATGTCAGGTG CGCGGGTGTA TTATTCGATG
GCTAAAGACG GGCTGTTTTT CAAAAAAGTA GGTCGGTTGA ACAAGAATGC GGTGCCCGAA
ATAGGCCTCT GGCTGCAATG CGTGATCGCC TCGCTGTGGG CGTTGAGCGG CAAATACGGC
AACCTGCTCG ATATGATTTC GTTTGTGGTC GTGGTATTTT ACATGCTCAC GATCATCGGC
ATATTCATCC TTCGCAAAAC CCGCCCCGAC GCCCCGCGGC CTTACAAGGC GTTTGGTTAC
CCGTTTTTAC CGATCATTTA CATTATCATG GGCATCGCGT TCTGCGTGCT GCTCATCATT
TATAAGCCAG AATACACCTG GCCGGGGCTC ATTATTGTGC TGCTGGGCAT TCCGGTTTAT
TATATGGTTG CCAGGAAGGA AGTAGCGGCG GTAGAGCAGG ACTAG
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| Protein sequence | MPQENTSFKP SLGLVDATML VAGSMIGSGI FIVSADIMRN TGSVGWLMFV WLITGFMTLT
AALSYGELSA MFPKAGGQYI YLKEAYNPLI GFLYGWSFFT VIQTATIAAV AVAFAKFTAY
LVPAFSEDLV ALDLGFLKIS PAQLLSIVVI VLLTFTNTRG VNSGKIIQTT FTLTKLLSLL
GLIVFGLIFM KPEVWAANWG EGMWDLHKLS PDGSIASYTT IAAFGAIAAS MVGSIFSSDS
WNNVTFIAGE IKNPQRNIGL SLALGTIIVT VIYVLTNVMY TGVLSLQEIA ASDKDRVAVT
ASHVIFGNSG TIVIAVMIMI STFGCDNGLI MSGARVYYSM AKDGLFFKKV GRLNKNAVPE
IGLWLQCVIA SLWALSGKYG NLLDMISFVV VVFYMLTIIG IFILRKTRPD APRPYKAFGY
PFLPIIYIIM GIAFCVLLII YKPEYTWPGL IIVLLGIPVY YMVARKEVAA VEQD
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