Gene Dfer_4272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4272 
Symbol 
ID8227875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5175828 
End bp5177297 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content57% 
IMG OID644932119 
ProductAldehyde Dehydrogenase 
Protein accessionYP_003088639 
Protein GI255038018 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCAT CCGATTTAGA CCTTATTCTT GAAAAAGCCC AGGCGGCATT CGTGGCGATG 
AACGCCTATG CATTGCGCCG CCGGGTCGCA TTGATGAACG CCATTGCCGA CGAGATCGAA
GCGCTTGGTC CGGAACTGGT GCAAACCGCC ATGGCCGAAT CCAACCTGCC CGAAGCACGC
CTGAACGGCG AAAAAGCGCG GACGGTGTTC CAGTGGAGAA GCTATGCCGA TGCGGTGGAA
AAGGGCTATT CGCTCGATGC GAGCATTGAT ACGGCCAACC CGCAGCGCGC GGTGCCCAAG
CCCGATATCC GCAAAACGAA TGTAGGATTA GGTCCTGTGG CGGTATTCGG TGCGAGCAAC
TTCCCGTTTG CATTCTCGAC GGCGGGAGGC GATACGGCCA GCGCCATTGC GGCGGGATGT
CCGGTAGTTG TGAAAGCGCA TCCGGGCCAC CCGAAAACGT CGCAGATCAT GGCCGACGCC
ATTAGCCGCG GGGTAGCCAA AGCGGGTTTT CCCGAAGGCA CATTTGCACA CATTTTTACA
GAAACCAATG AGGAATCCCA GGCGCTCGTA AGCCATCCGG TGATTAAGGC GGTGGGTTTT
ACCGGTTCCA ACCGCGGCGG TTTGGCTTTG GTTGAGATCG CCAACAAGCG GAAGGAGCCG
ATCCCGGTAT TTGCCGAAAT GGGCAGCATT AACCCTGTGT TCCTGCTGCC GGGCAAGCTG
GCAACTGCCG GCGCCGATCT GGCCAAACAA TATGCCGGTT CGCTGACATT AGGCGTGGGG
CAATTTTGTA CCAACCCCGG CTTGCTGATC ACGGAGCAAA ATCCCGCATT GGACAGTTTT
ATCGAAGCAT TGAACCAGGA AATCGTAAAC ATTCTTCCGG CGCCGATGCT GAATGCAGGC
ATTGCTGTTG CTTATCGCGG AAATCGCGAG AAAGTGATCG GCCAAAGCGG CGTGGAACTG
GTAGCGGTAG CGGCGAGCGA AGCAGCCGAC GGTCATGGTG CTGCTACGGT GGCGACGGTT
TCAGGTGTTG ATTTTTTGAT TAATGATGAA CTGCAAACCG AAGTTTTCGG GCCATTCGCA
TTGATCGTAA AATGCCGGAA TGCGGAGGAA GTGCTGGCGG TTACCGAAAA GCTGCACGGC
CAGCTCACGG CCACTTTGCT GGCCACGAGC GAAGACCTCG CCTCGCACCG CGAACTGGTG
GCGGCGATTC AGAACAAATG CGGCCGCATT ATCTTCAACA ACTTCCCGAC GGGCGTTGAA
GTCTGCAAAT CCATGCACCA CGGCGGCCCA TTTCCGTCGT CGAGCAACAG CCAGTTTACG
TCCGTCGGTC CGGACGCGAT CAAGCGGTTT ACCCGCCCAT TGAGCTTCCA AAACTGGCCC
GACGAATTTT TACCCGATGA ATTGAAAAAC GCCAACCCGC TGGGGATTTG GCGGACGGTG
GATGGGGAGG TGACGAAGCG GGAAGTTTGA
 
Protein sequence
MNSSDLDLIL EKAQAAFVAM NAYALRRRVA LMNAIADEIE ALGPELVQTA MAESNLPEAR 
LNGEKARTVF QWRSYADAVE KGYSLDASID TANPQRAVPK PDIRKTNVGL GPVAVFGASN
FPFAFSTAGG DTASAIAAGC PVVVKAHPGH PKTSQIMADA ISRGVAKAGF PEGTFAHIFT
ETNEESQALV SHPVIKAVGF TGSNRGGLAL VEIANKRKEP IPVFAEMGSI NPVFLLPGKL
ATAGADLAKQ YAGSLTLGVG QFCTNPGLLI TEQNPALDSF IEALNQEIVN ILPAPMLNAG
IAVAYRGNRE KVIGQSGVEL VAVAASEAAD GHGAATVATV SGVDFLINDE LQTEVFGPFA
LIVKCRNAEE VLAVTEKLHG QLTATLLATS EDLASHRELV AAIQNKCGRI IFNNFPTGVE
VCKSMHHGGP FPSSSNSQFT SVGPDAIKRF TRPLSFQNWP DEFLPDELKN ANPLGIWRTV
DGEVTKREV