Gene Dfer_4076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4076 
Symbol 
ID8227674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4921990 
End bp4923246 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content52% 
IMG OID644931919 
Productmetallophosphoesterase 
Protein accessionYP_003088444 
Protein GI255037823 
COG category[R] General function prediction only 
COG ID[COG1408] Predicted phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.660499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0108221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAA CCTTCTTTTT TATCATACTT GCATTCATCC TGTTTGCCAT CGACTGGTAC 
GTCTGGCAGG GCTTGAAACT GGCCATTCGC GGCCTCGCTC CTTTGACACA ACGCTGGATC
GGCGGCGCAT ATTGGGCGCT GACCGTGCTC ACTTTGGGCG CTTACATCGG CATGCAATTG
CTCCCGCCGG ATTATTTCAA AAGCACTACC CGCACATTTG TAGTCGCATT CATCGCCATT
CCCTATCTCT CGAAACTGCT GGCGGTAGTG ATCCTGCTGA TCGACGACAT CCGCCGCTTT
TTTCAATGGA TCGTCAGCTT TTTCGCTCCT TCCGTTGCAA CGCCTTCGCC TGAAACCGGC
GAGCCGACGA TTCCGCGTTC ACAGTTCCTG GCGACCACGG CTGTGGTTGC AGGGGCCGGT
TTAATGGGCA CGTTTGCATA TGGAATCCTT TCGGGAGCGC ACGATTACCG CATTCGCCGT
GTGAAGGTGC CTTTGAAAAA CCTTCCGCGA CAGTTTCACG GCATGAAGAT CGCCCAACTT
TCCGACATCC ACTCGGGTAG TTTTTTCAAT AAAACAGCGG TGAAGGGCGG TGTGGAAATG
TTGATGAAGG AAAAGCCGGA TATCGCATTC TTCACCGGCG ACCTGGTGAA CGACCGGGCG
ATGGAGGTGA AGGATTATAT CCATATTTTC GACAAAGTAA AAGCGCCGCT GGGTGTGCAT
TCGGTACTCG GCAACCACGA TTATGGCGAC TACTTCCACT GGGCGGACGT GCAGTCGAAA
ACCAATAATC TCTCAGATCT GAAAAAAGCG CATGAATTGC TGGGCTGGAA GCTGATGCTG
GACGAAAACC GGCCCATTAC CGTCGATGGC GAATCAATCG GGCTGATTGG CATTCAGAAC
TGGGGCGCGG GTAATTTTGC CAAATATGGA AACCTCGAAA AGGCTTATGC GCATACCGAT
GAATACCCGG TTAAAATATT GCTCTCGCAC GATCCCAGCC ATTGGGAAGC ACAGGTTTTG
CCGAAATATA AAGACATAGA CCTTGCGCTT GCCGGTCACA CACACGGGAT GCAATTCGGT
GTGGAAATCG GTAAAGTGAA GTGGAGCCCG GTGCAGTACC GCTACAAGCG ATGGGCGGGA
CTTTACCAGG AGGAAGATCA GTACTTGTAC GTCAACCGCG GATTTGGATA TTTAGGGTAT
CCGGGCCGCG TGGGTATCCT CCCCGAAATC ACAATCCTGG AATTGGTTAA AGCATAA
 
Protein sequence
MNRTFFFIIL AFILFAIDWY VWQGLKLAIR GLAPLTQRWI GGAYWALTVL TLGAYIGMQL 
LPPDYFKSTT RTFVVAFIAI PYLSKLLAVV ILLIDDIRRF FQWIVSFFAP SVATPSPETG
EPTIPRSQFL ATTAVVAGAG LMGTFAYGIL SGAHDYRIRR VKVPLKNLPR QFHGMKIAQL
SDIHSGSFFN KTAVKGGVEM LMKEKPDIAF FTGDLVNDRA MEVKDYIHIF DKVKAPLGVH
SVLGNHDYGD YFHWADVQSK TNNLSDLKKA HELLGWKLML DENRPITVDG ESIGLIGIQN
WGAGNFAKYG NLEKAYAHTD EYPVKILLSH DPSHWEAQVL PKYKDIDLAL AGHTHGMQFG
VEIGKVKWSP VQYRYKRWAG LYQEEDQYLY VNRGFGYLGY PGRVGILPEI TILELVKA