Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4074 |
Symbol | |
ID | 8227672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 4921033 |
End bp | 4921593 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644931917 |
Product | protein of unknown function DUF179 |
Protein accession | YP_003088442 |
Protein GI | 255037821 |
COG category | [K] Transcription |
COG ID | [COG1678] Putative transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.499752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00807045 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGTCAG CCGCAAAAGT TTCAAAAGGA AGCTTGCTTA TCGCCAAGCC TTTTCTGGGC GATCCCAATT TTGAGAGGGG AGTGATTCTC ATGTGTGAGC ATAATGAAGA AGGAAGCTTT GGTTTTGTGC TGAACCAAAC GACGGACCTT TTCCTGGGCG ATGTGCTTGA AGAAACTATC TACCAGGATA TTACATTGCA TTTGGGTGGC CCTGTCGAGA AGAATACGCT GCATTTCATC CACCGCCGCC CCGACCTCGT CACGGGCGGT ACAGAGATTA TGAAGGATGT TTACTGGGGA GGCGATTTCA ACAATGTGAA AACACTGCTC AACCTGAACA CGCTGAAACA GGAAGACGTT ATGTTTTTCA TTGGCTACTC TGGATGGAGC GGCGGCCAGC TCGATGATGA GATCAAACAG GATTCCTGGA TTATCTCATC CACCAGCTCC GATTTCCTTT TTTCAACACC GCCCGGCAAC TTCTGGCGCG AAGTTCTCCG CAGTATGGGC GGCGAATACC GCTCCATTGC CCATTATCCC ATCGATCCCC GGCTCAACTG A
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Protein sequence | MPSAAKVSKG SLLIAKPFLG DPNFERGVIL MCEHNEEGSF GFVLNQTTDL FLGDVLEETI YQDITLHLGG PVEKNTLHFI HRRPDLVTGG TEIMKDVYWG GDFNNVKTLL NLNTLKQEDV MFFIGYSGWS GGQLDDEIKQ DSWIISSTSS DFLFSTPPGN FWREVLRSMG GEYRSIAHYP IDPRLN
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