Gene Dfer_4074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4074 
Symbol 
ID8227672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4921033 
End bp4921593 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content50% 
IMG OID644931917 
Productprotein of unknown function DUF179 
Protein accessionYP_003088442 
Protein GI255037821 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.499752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00807045 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGTCAG CCGCAAAAGT TTCAAAAGGA AGCTTGCTTA TCGCCAAGCC TTTTCTGGGC 
GATCCCAATT TTGAGAGGGG AGTGATTCTC ATGTGTGAGC ATAATGAAGA AGGAAGCTTT
GGTTTTGTGC TGAACCAAAC GACGGACCTT TTCCTGGGCG ATGTGCTTGA AGAAACTATC
TACCAGGATA TTACATTGCA TTTGGGTGGC CCTGTCGAGA AGAATACGCT GCATTTCATC
CACCGCCGCC CCGACCTCGT CACGGGCGGT ACAGAGATTA TGAAGGATGT TTACTGGGGA
GGCGATTTCA ACAATGTGAA AACACTGCTC AACCTGAACA CGCTGAAACA GGAAGACGTT
ATGTTTTTCA TTGGCTACTC TGGATGGAGC GGCGGCCAGC TCGATGATGA GATCAAACAG
GATTCCTGGA TTATCTCATC CACCAGCTCC GATTTCCTTT TTTCAACACC GCCCGGCAAC
TTCTGGCGCG AAGTTCTCCG CAGTATGGGC GGCGAATACC GCTCCATTGC CCATTATCCC
ATCGATCCCC GGCTCAACTG A
 
Protein sequence
MPSAAKVSKG SLLIAKPFLG DPNFERGVIL MCEHNEEGSF GFVLNQTTDL FLGDVLEETI 
YQDITLHLGG PVEKNTLHFI HRRPDLVTGG TEIMKDVYWG GDFNNVKTLL NLNTLKQEDV
MFFIGYSGWS GGQLDDEIKQ DSWIISSTSS DFLFSTPPGN FWREVLRSMG GEYRSIAHYP
IDPRLN