Gene Dfer_4060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4060 
Symbol 
ID8227658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4907330 
End bp4908277 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content51% 
IMG OID644931903 
Productputative phosphate ABC transporter, phosphate- binding component 
Protein accessionYP_003088428 
Protein GI255037807 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0226] ABC-type phosphate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000141067 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000409184 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAAAGA GATGGACAGC GCTGCTGTTG TTGCTACCCC TCGGTGTAGC TGGATTATTG 
AGATGTACTT CGTCCAACGG CGACCTGGAC AACCCGCGGC AAGGTACAAT CACCATTGCC
GCAGATGAGT CGTTCAAGCC GCTGGTTAAT TCGTTGACAA GTGCGTATGA GGGAATTTAC
CCCAATGCGC ACTTCAAAGT GGATTACAAG CCAGAACAGG AAGCGATCCG ACAACTTCTG
AACGATAGTG CCCGGGTCAT TTTCGCGACG CGACAGCTGA ACGAAAAGGA GCTGGAAATG
ATCAAAAAGC AGAAGGGCAG CCAGAAATTC CAGCACATTG CAACCGACGG ACTGGCGCTC
GTGATCGGAA AAGCGAACCC GGATAGTCTT ATCACGATTC CGGAATTGAA AGCGATCATG
GAAGGTAAAA TCACCGACTG GTCGCAGATC AAGGGAGCAC AGCAGGGCCT GATCACATTG
GTTTTCGATA ATGCGAATGC CAGTAATCTG AACTTCGTGC TCAACAAGTT TGGCGTTAAG
GACATTCAGA AGCTGAGGAT TATCTCAGCG GGATCTAACG AAAATGTCAT CAAGGATGTC
CGGGAAAACC CGACGCACCT GGGTTTCATC GGGGTGAACT GGATCAGCGA TGGAAATTCG
CTCGCATCGG AAGAGCTATC GGAAGGCATT CGGGTGATGG GAGTTGCCAA AGACGCCCAG
CCTGACTCAC TTTCGGACTA CATTCAGCCG TTTCAGGCGG GATTGGAGTT CAAGCGTTAT
CCGCTGCACA GGGACCTTTA CATTATCAGC CGGGAAGGCT ACTCGGGGCT CGGCGGTGGG
TTGATGACCT ACATCGCCCG GGACGTCGGA GGGCTGATTA TTCAGAAAAT GGGTTTGCTG
CCGACGGTAG TTTATCCGAG AGAGCTGGAA ATCAAGAAAG AGTTATAG
 
Protein sequence
MRKRWTALLL LLPLGVAGLL RCTSSNGDLD NPRQGTITIA ADESFKPLVN SLTSAYEGIY 
PNAHFKVDYK PEQEAIRQLL NDSARVIFAT RQLNEKELEM IKKQKGSQKF QHIATDGLAL
VIGKANPDSL ITIPELKAIM EGKITDWSQI KGAQQGLITL VFDNANASNL NFVLNKFGVK
DIQKLRIISA GSNENVIKDV RENPTHLGFI GVNWISDGNS LASEELSEGI RVMGVAKDAQ
PDSLSDYIQP FQAGLEFKRY PLHRDLYIIS REGYSGLGGG LMTYIARDVG GLIIQKMGLL
PTVVYPRELE IKKEL