| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3947 |
|---|
| Symbol | |
|---|
| ID | 8227542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 4793507 |
|---|
| End bp | 4795507 |
|---|
| Gene Length | 2001 bp |
|---|
| Protein Length | 666 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644931788 |
|---|
| Product | aminopeptidase precursor |
|---|
| Protein accession | YP_003088316 |
|---|
| Protein GI | 255037695 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTT CAGTATTTCG TCTGGGCGTC ATTGCAATGA GCTGCCTGGG CTTCTTCAAC
AACACTATTG CACAGGAGGC GGAGAAGGTG AAATATGATC ACCATGTCCT TTTTCATCCC
CTGTTTAATT TCCAGCCGGG CAACGAATAC CGGACGGGAA GCGGTGCTCC GGGGCCAAAG
TACTGGCAAA ACCGGGCCGA TTACAAGATT AACGTTACGC TCGAAGAGGA AAAAGGCACT
GTGAGCGGGG AGGTGGAGCT TACCTATAAA AACAATAGTC CCGAAAACCT GGAATTTATC
TGGCTGCAAC TCGACCAGAA TGCATTCGGA AGCCATTCGA GAGGTGCGCA GACGACGCCG
GTAACGGGCG GCCGTTTTGG CAACGCAGGT TTCGATGGAG GCGATTCCAT TAAATCGGTA
AGCGTGCAGC AAGGCAAAGG CTCGTTCGTG GATGCGGAAT ACAAAATCAC CGACACCCGC
ATGCAGATCC GCCTCAAAAC ACCCATGAAA GGTAATGGCG ATGTGATCAA AATCAAGCTG
GCCTATTCAT TCAAAATCCC CGAATACGGC TCCGACCGCA TGGGAACGCT CGAAACCAAG
AATGGTATCG TGTACGAAAT GGCCCAATGG TATCCGCGCG TGGCTGTTTT CGACGACATC
GAAGGCTGGA ACCTGCTGCC CTACCTCGGC GCCGGCGAGT TTTACCTCGA ATATGGCGAT
TTTGAATACA ATGTAACTGT TCCCTGGGAC CATATCGTGG TAGGTTCGGG CGAATTGCTC
AATCCGAATG AAGTACTCAC CGCCGAGCAG CGCAAAAGAC TGGCTGACGC CGCAAAAAGC
GACCAGACCG TCGTGATACG CAGCGCGGAG GAGGTGACCA ACCCCAACAC GCGGCCTAAG
CAATCGGGCA CGCTCACATG GCGCTTCCGC TGCTTGCAGG CGCGCGACAT TGCCTGGGCA
AGTTCCAAAG CATTTGTATG GGATGCGGCG CGGATGAACC TGCCGAAAGG CAAAACGGCA
CTGGCGCAGT CGGTGTACCC TGCCGAGGAT GGCGGGCTGG AAGGCTGGGG CCGCTCTACG
GAATATGTGA AGGGCTGTAT CGAGTTTTAT TCCAACTACA TTCATGAATA CACCTACCCC
GTGGCGACCA ACGTGGCCGG CATCGTGGGT GGTATGGAAT ACCCGGGCAT TGTGTTCTGC
AGCAGCAAAA GCCGCAAGGA CGATTTGTGG GGCGTAACCG ACCACGAGTT TGGTCACAAC
TGGTTCCCGA TGATCGTTGG TAACAACGAG CGCAAATATG GATGGATGGA TGAGGGTTTC
AACACGTTCA TCAACTTCCT TTCGAGCGAT AACTTCAATA ATGGCGAATA CAAAACGACC
CAGATGAACG ATATGCACCG TCTGGCGCCG ATTATCTTCC GCCCGAAAGC CGACCCGATC
ATGACGATCC CCGACGTGGT GCAGGCCGTA AACCTGGGCT GGGAAGCGTA TTACAAGCCT
GCTTTGGGCC TGAAAATGCT TCGGGAGCAG GTTTTAGGCA AAGAGCGCTT CGACTATGCG
TTCAAAATTT ACGTGCAGCG CTGGGCATTC AAGCATCCTA CGCCTTACGA CTTCTTCCGT
ACGATGGAGG ACGCCGCCGG CGAAGACCTG GGCTGGTTCT GGAAAGGCTG GTTCTTCGAG
AACTACAAGC TCGACCAGGC GGTGAAGCAG GTTGCCTACG TGGAGCAAAA CCCGCAAAAA
GGATCTTACA TTACGATCGA GAACCTGGAC CAGCTGGCGA TGCCTGTGAA AGTGGATATC
GAGGAAGTGA GCGGCAAAAA GACGCGCGTA GAACTGCCGG TGGAAGTATG GCAGCGCGGC
GGTACGTGGA CTTTTAAAGC GGCTACTCAG CAGCCAATCC GCTCGGTAAC GATCGACCCG
GACCGCAACC TTCCGGACAT TAATCCTGAA AACAATGTGT GGAAACCGGC CTCATACAAC
TCCGAGCCCG ATGTGAACTA G
|
|---|
| Protein sequence | MKISVFRLGV IAMSCLGFFN NTIAQEAEKV KYDHHVLFHP LFNFQPGNEY RTGSGAPGPK
YWQNRADYKI NVTLEEEKGT VSGEVELTYK NNSPENLEFI WLQLDQNAFG SHSRGAQTTP
VTGGRFGNAG FDGGDSIKSV SVQQGKGSFV DAEYKITDTR MQIRLKTPMK GNGDVIKIKL
AYSFKIPEYG SDRMGTLETK NGIVYEMAQW YPRVAVFDDI EGWNLLPYLG AGEFYLEYGD
FEYNVTVPWD HIVVGSGELL NPNEVLTAEQ RKRLADAAKS DQTVVIRSAE EVTNPNTRPK
QSGTLTWRFR CLQARDIAWA SSKAFVWDAA RMNLPKGKTA LAQSVYPAED GGLEGWGRST
EYVKGCIEFY SNYIHEYTYP VATNVAGIVG GMEYPGIVFC SSKSRKDDLW GVTDHEFGHN
WFPMIVGNNE RKYGWMDEGF NTFINFLSSD NFNNGEYKTT QMNDMHRLAP IIFRPKADPI
MTIPDVVQAV NLGWEAYYKP ALGLKMLREQ VLGKERFDYA FKIYVQRWAF KHPTPYDFFR
TMEDAAGEDL GWFWKGWFFE NYKLDQAVKQ VAYVEQNPQK GSYITIENLD QLAMPVKVDI
EEVSGKKTRV ELPVEVWQRG GTWTFKAATQ QPIRSVTIDP DRNLPDINPE NNVWKPASYN
SEPDVN
|
|---|
| |