| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3931 |
|---|
| Symbol | |
|---|
| ID | 8227526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 4781389 |
|---|
| End bp | 4781922 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644931772 |
|---|
| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
|---|
| Protein accession | YP_003088300 |
|---|
| Protein GI | 255037679 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAACG AATCGAAATG GGCCATCGGC GGTGCAATCA AAGATCCCAA AAGCATTACT
GCGCAATGGA ACCCTTCCAA CCTGAGCCTG ATCGACGGCG TGAAGGTGAA GGAGGTCAAG
AATGTAGTTA AAAATAATGG CTTCCTGACG GAAATCTACC GGCAGGACTG GGAACTGGAC
AACCTGACCG TGGACCAGAT TTTCCAGGTA TCGCTGTTGC CCGGAGGCAT TTCGGCCTGG
CACGCGCACG AAATCACCAC CGATCGCATT TTCGTAAACA CGGGGCTGAT CAAAGTGGTG
CTGTACGACG CCCGCGAGGA ATCGCCTACT TACGGGCAAA TCAATGAATT CCGCTGCGGT
GCATTGAGGC CGTTGCTGAT CATCGTGCCG CCGCGCGTAT GGCATGGCGT TCAGAACTTC
ACGAATGAGC ACGCGGCGTT ACTGAACATC GTGGACAAGG CTTACCAATA CGACGATCCC
GATCACTGGC GCATCCCGTT GGATTCGCCC GAGATCCCCT ACAAATTTTC CTGA
|
|---|
| Protein sequence | MTNESKWAIG GAIKDPKSIT AQWNPSNLSL IDGVKVKEVK NVVKNNGFLT EIYRQDWELD
NLTVDQIFQV SLLPGGISAW HAHEITTDRI FVNTGLIKVV LYDAREESPT YGQINEFRCG
ALRPLLIIVP PRVWHGVQNF TNEHAALLNI VDKAYQYDDP DHWRIPLDSP EIPYKFS
|
|---|
| |