| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3862 |
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| Symbol | |
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| ID | 8227457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4698175 |
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| End bp | 4701081 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644931703 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_003088231 |
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| Protein GI | 255037610 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.609984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.59901 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAAC TAGCTGTGCC CCGGATCGAG GCCGATCAGT TCGATGAACT GGATCCGAGA
CAATACATCC TGATCAAAGG TGCCCGAGTT AACAATCTGA AAAACATTGA TGTGGCGATC
CCGCGCAACA AGCTGGTCGT CATTACGGGC CTCTCCGGTT CCGGCAAGTC CTCACTGGCT
TTCGACACGC TTTTCGCGGA GGGCCAGCGC ATGTACGTGG AAAGCCTCAG CAGCTACGCC
AGGCAATTTC TGGGGCGGAT GGAAAAGCCC GAAGTGGAGT ATATCAAGGG CATTTCACCG
GCTATTGCCA TTGAGCAGAA GGTCAATACC CGTAATCCAA GGTCTACCGT GGGCACATCC
ACTGAGATTT ACGATTATCT TAAACTGCTT TTCGCGCGGA TTGGGCATAC CTATTCGCCC
GTTTCCGGCG AAATCGTGCG GAAAGATTCG GTGACCGACG TGGTGAATTA CATGCTTGCG
CACGATGAGG GCACGCGTGT GATGATTCTC GCGCCGCTGC TCATCCGCGA CGGCCGCTCG
CAGATCGAGG AGCTCACCAT TCTGCTATCC AAAGGCTACA ACCGCATTGT GCTCAACGAT
GAGGTAGTGT CGATAGAAGA CATTCTCGAA AATCCGGACC AGTTTCCGCA AGCCGGGAAC
CGGGTTTTTA TCCTCATCGA TCGCGCCGCG ATCCGCCACG ACGACGAAGA CACGCAATAC
CGCCTCTCCG ACTCCGTGCA AACCGCGTTT TTTGAAGGTG AAGGCACGTG TACAGTGCAT
ATTGTAGGCG GTGAAAAAAG GGTTTTTTCC GATAAGTTCG AGCTCGACGG CATTACGTTC
GAAGAACCGA CCGTGAACCT TTTCAGCTTT AACAATCCAT TCGGCGCCTG CAAAAGGTGC
GAAGGATTTG GAAAAATACT AGGCATTGAC CCCGACCTGG TGATCCCCGA TAAAAATCTT
TCGGTGTACG ACGGTGCCAT TGCGCCCTGG CGCACCGAAA AAATGGGCGA ATGGCTGGTG
CCGCTCGTCC GCAACGGCGT CAAGTTCGAT TTCCCGATCC ACAGACCTTA CAAAGACCTA
ACGCCGGTCC AAAAAGAGCT TTTATGGACC GGTAACCAAT ATTTTCAGGG AATCAACGAT
TTCGTTTCAG AACTTGAATC ACAGACACAC AAAATCCAGT ACCGGGTAAT GCTCTCGCGT
TTCCGTGGGC GCACCACCTG CCCCGACTGC CGCGGCTCGC GCTTGCGGAA GGATGCTTCG
TATGTCAAAA TCGGCGGCAA ATCCATTACC GATCTGGTGT TAATGCCTAT CCAGGATGTT
TCGGTGTTTT TCAAACAGCT CGAACTCGGC GACCACGACC GGCAAATCGC CCGCCGTGTC
CTGACCGAAA TCGAATCGCG CCTCGACTAC ATGAACCGCG TGGGCCTCGG CTACCTGACA
TTGAACCGGT TGACGAGCAC ATTGTCGGGT GGCGAGTTCC AGCGCATTAA GCTGGCCACT
TCGTTGGGAA GCGCGCTGGT GGGCTCGATG TACATTCTGG ATGAACCGAG CATTGGCTTG
CACCCGCGCG ATACGCAGAG GCTGGTAGGC GTATTGGAAT CGCTGCGCGA TCTCGGCAAT
ACGGTGATTG TGGTGGAACA CGAGGAGGAA GTTATGCACG CCGCAGATCA GATCATCGAC
ATCGGCCCCG AAGCGGGAAC CGGCGGCGGC CACGTCGTTT TTCAGGGAAA TCAAAGCGAT
ATCGAGGAGC TGAAAATCAA TGGTTCAGGG GCAGGGAATA GTCAGGAGGG CATTGGTAGT
CAGGAGGTCA TGAGTAGTGG GGCCGGGCAT ATGCGGTCAC ATACTTTGGA TTTTCTTTTG
GGAAATGATT CCATTCCCGT TCCTTCTGTC CGCAGAAAGT CTTTGCATTT CCTGGAAATT
AAAGGTGCCA GGGAGAATAA TTTGAAGGAG CTGGACGTGA AAATTCCTTT GAACAACCTG
ACTGTCGTAA CGGGCGTGAG TGGTTCAGGG AAATCTACTT TGATCCGTAA AATCCTGTAT
CCCGCTTTAA TGCGCTTGAA AGGCGAATTC AGCGAGGATG TGGGGCGTTT TGACGCGCTC
ACGGGCAGTA TCGATCGCAT TGAGGCGGTG GAGATGATCG ACCAGAATCC GATCGGCAAG
TCGTCGCGTT CCAACCCGGT GACTTATATT AAGGCATATG ATTATATCCG GCAAATGATG
TCGGAGCAGC CGCTCTCGAA AGCGCGCGGC TATAAACCTT CGCATTTCTC CTTTAACGTC
GACGGCGGCC GCTGCGAAAT ATGCCAGGGT GAAGGGGAAG TGAAGGTCGA AATGCAGTTT
ATGGCCGACA TTTACCTGAC TTGCGAGGGC TGCAACGGCA AGCGTTTCAA GCAGGAAATA
CAGGAAGTGC GCTATCACGA CAAAGATATT GCCGAAATCC TGGACATGAC TGTTGATGAA
GCGATCGACT TTTTCCGGGA AACGGAACCT AAGCTGGCCG ACAAGCTGCT GCCTTTGCAG
GAAGTGGGTC TCGGGTACGT CGGTCTGGGG CAGTCGTCGA ACACCTTGTC CGGCGGTGAA
GCGCAGCGTG TGAAACTGGC CTCTTTCCTC GGCAAAGGCT CTTCCAACAA AGGCAAAACG
CTGTTTATTT TCGATGAACC AACGACCGGT CTGCATTTCC ACGACATTAA AAAGCTGCTG
AAAGCCATTA ATGCGTTGGT GGAACAGGGC GATAGCGTGA TCATCATCGA GCACAATATG
GAGGTGATCA AAAGCGCCGA CTGGATCATC GACCTTGGTC CGGAGGGCGG CGAAAACGGG
GGTAACCTCA CCTTCACTGG CACACCGGAG GAGATGCTTA AACTGGACGG GAATTACACG
GCGGAGTTTT TGAAGGAAAA GATTTGA
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| Protein sequence | MMQLAVPRIE ADQFDELDPR QYILIKGARV NNLKNIDVAI PRNKLVVITG LSGSGKSSLA
FDTLFAEGQR MYVESLSSYA RQFLGRMEKP EVEYIKGISP AIAIEQKVNT RNPRSTVGTS
TEIYDYLKLL FARIGHTYSP VSGEIVRKDS VTDVVNYMLA HDEGTRVMIL APLLIRDGRS
QIEELTILLS KGYNRIVLND EVVSIEDILE NPDQFPQAGN RVFILIDRAA IRHDDEDTQY
RLSDSVQTAF FEGEGTCTVH IVGGEKRVFS DKFELDGITF EEPTVNLFSF NNPFGACKRC
EGFGKILGID PDLVIPDKNL SVYDGAIAPW RTEKMGEWLV PLVRNGVKFD FPIHRPYKDL
TPVQKELLWT GNQYFQGIND FVSELESQTH KIQYRVMLSR FRGRTTCPDC RGSRLRKDAS
YVKIGGKSIT DLVLMPIQDV SVFFKQLELG DHDRQIARRV LTEIESRLDY MNRVGLGYLT
LNRLTSTLSG GEFQRIKLAT SLGSALVGSM YILDEPSIGL HPRDTQRLVG VLESLRDLGN
TVIVVEHEEE VMHAADQIID IGPEAGTGGG HVVFQGNQSD IEELKINGSG AGNSQEGIGS
QEVMSSGAGH MRSHTLDFLL GNDSIPVPSV RRKSLHFLEI KGARENNLKE LDVKIPLNNL
TVVTGVSGSG KSTLIRKILY PALMRLKGEF SEDVGRFDAL TGSIDRIEAV EMIDQNPIGK
SSRSNPVTYI KAYDYIRQMM SEQPLSKARG YKPSHFSFNV DGGRCEICQG EGEVKVEMQF
MADIYLTCEG CNGKRFKQEI QEVRYHDKDI AEILDMTVDE AIDFFRETEP KLADKLLPLQ
EVGLGYVGLG QSSNTLSGGE AQRVKLASFL GKGSSNKGKT LFIFDEPTTG LHFHDIKKLL
KAINALVEQG DSVIIIEHNM EVIKSADWII DLGPEGGENG GNLTFTGTPE EMLKLDGNYT
AEFLKEKI
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