Gene Dfer_3861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3861 
Symbol 
ID8227456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4697699 
End bp4698124 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content53% 
IMG OID644931702 
Producthypothetical protein 
Protein accessionYP_003088230 
Protein GI255037609 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000667493 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.500407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCC GGTCTTTTGA AGAAGAGTTT GCTCCTTACG GCAAGGAACC CGCTTCCGAA 
TATTTAGTCG TCAAAACGTC CCGCGAAGGC GTCATGCGCT CTGCCGCAGA TGAGATTTCC
GATTTGGTGG GGCTCACCGA TAACGAAATC GCTTATGTAT TGGGCATGAC GCCCCGCAAT
CTGCATCGCA TTCAGGGGGA GAAACGCCTT GGTACCGATG CTTCCGAGCG GCTGCTACTG
CTTCGGAATG TGCTCATTCA TGCATTGGCT ACCTTTGAAG GAAAGGAAAG TGTCGTCAGG
CATTGGCTGA GAACACCTAT CACTTCGCTC AACGACCAGT CGCCGCTGCA AATGATGGAC
ACCGTTACGG GCTTCGGGCT GGTAGATAAT GTGCTCGGGC GTCTGGATTA TGGTTTACCT
GCCTGA
 
Protein sequence
MAIRSFEEEF APYGKEPASE YLVVKTSREG VMRSAADEIS DLVGLTDNEI AYVLGMTPRN 
LHRIQGEKRL GTDASERLLL LRNVLIHALA TFEGKESVVR HWLRTPITSL NDQSPLQMMD
TVTGFGLVDN VLGRLDYGLP A