| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3833 |
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| Symbol | |
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| ID | 8227427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4671532 |
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| End bp | 4673034 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644931673 |
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| Product | GH3 auxin-responsive promoter |
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| Protein accession | YP_003088202 |
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| Protein GI | 255037581 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.723154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.130127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAATCA GATCAATTTT GAGCAGGCCG CTGGCCCGTT ACATTGTTAA GCAGCAACAG
GAATGGATCG CGCGAAGTGT TGAGGTCCAG GAAAAATGGA GAGCGGAACT AGTTAGGAAG
GCGGCCGGAA CGCAGTTTGG AAAAGACCAT TATTTCAAAG ATATCCATAG CTATGCCGAC
TACAAGCAGG CCGTTCCGGT GAGCGATTAT GAGGACCTGA AACCGTATGT CGAGAAAATA
AAATCCGGGG AAAGTGATAT TTTGTGGCCT GGCAAACCTT TGTATTTTGC CAAAACGTCA
GGTACAACTT CCGGCACCAA GTACATTCCC ATCTCCCGGG ATTCCATTTC CAATCACATT
GACTCGGCGC GTAATGCCAT TTTGACGTAT ATTGAAGAGA CGCAAAAGTC TGAATTTCTG
GATAATAAGC TGATTTTCCT ATCCGGCAGT CCGATACTGA CAGATACCGG GGGAGTACTG
ACAGGACGCC TGTCAGGCAT CTCCAACCAC CACGTTCCCG CCTACCTGCG TTCCAACCAG
CTCCCGAGCT ACAACACGAA TTGCATTGAA GATTGGGAAA CGAAGCTGGA TAAGATCATC
GACGAAACCA TCGACCAGCG CATGTCGCTC ATTTCGGGCA TTCCTCCCTG GGTACAAATG
TACTTCGACC GCATTACCGA GCGGACGGGG AAGAAGATCA AAGACGTGTT CCCTGATTTC
TCGCTGTTCA TTTACGGCGG TGTCAACTTC GAGCCCTACC GCGCCAAGCT GTTCGAATCC
ATCGGCAAGC GCATTGATTC CATTGAATTA TACCCCGCCT CGGAAGGCTT CCTGGCCTAT
CAGGATAAAC AAAATGACGA AGGCCTCCTG CTTTTGCTCG ATACGGGCAT TTTCTTCGAA
TTTATTCCCG TTGAAAACTA CTTCGACGAA AACCCGCGCC GATTATCCAT CGGTGAAGTG
GAAACGGGCA GGAATTACGC GGTGATCGTC AATAACAACG CGGGATTATG GGGTTACTCG
CTGGGCGATA CTGTCAAGTT TGTCTCGACA GACCCTTACA AAGTGCTCGT GACGGGCCGC
ATCAAGCATT TTATTTCCGC TTTCGGCGAA CACGTGATCG GTGAGGAAAT TGAAAAAGCA
TTGAAATACG CATTGGAACG CCATCGCGAA GTGGAAGTGG TGGAACTGAC CGTGGCGCCG
ATGGTAAATT CGGCGGATGG CGGCCTTCCT TATCATGAAT GGCTGGTGGA ATTCGCTACG
CCTCCGAATG ACATGGAGCA ATTTGCCAAA GACCTCGACC GCAGGCTCAC CGAGCTGAAC
ATTTATTACA AAGACCTCAT CACGGGAAGC ATTCTGCGCC GTCTCGAACT CACGCCGCTG
CGCAAAAATT CCTTCATCGA TTTTATGCGT GCCAATGGGA AGCTCGGCGG CCAGAACAAG
GTCCCGCGCC TGTCCAACGA CCGCAAAATA GCCGACGAGC TGACGCGCCT GAACCAAAGT
TGA
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| Protein sequence | MGIRSILSRP LARYIVKQQQ EWIARSVEVQ EKWRAELVRK AAGTQFGKDH YFKDIHSYAD
YKQAVPVSDY EDLKPYVEKI KSGESDILWP GKPLYFAKTS GTTSGTKYIP ISRDSISNHI
DSARNAILTY IEETQKSEFL DNKLIFLSGS PILTDTGGVL TGRLSGISNH HVPAYLRSNQ
LPSYNTNCIE DWETKLDKII DETIDQRMSL ISGIPPWVQM YFDRITERTG KKIKDVFPDF
SLFIYGGVNF EPYRAKLFES IGKRIDSIEL YPASEGFLAY QDKQNDEGLL LLLDTGIFFE
FIPVENYFDE NPRRLSIGEV ETGRNYAVIV NNNAGLWGYS LGDTVKFVST DPYKVLVTGR
IKHFISAFGE HVIGEEIEKA LKYALERHRE VEVVELTVAP MVNSADGGLP YHEWLVEFAT
PPNDMEQFAK DLDRRLTELN IYYKDLITGS ILRRLELTPL RKNSFIDFMR ANGKLGGQNK
VPRLSNDRKI ADELTRLNQS
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