| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3818 |
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| Symbol | |
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| ID | 8227412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4657701 |
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| End bp | 4658993 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644931658 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_003088187 |
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| Protein GI | 255037566 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0225862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.248482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACAAA CGAATTTTAT CCGCGAAAAC CGCGAACTAA CCATCGCGGG ACTGACTAAA
AAGCATTTCA AGGATGCCGA GCAGGCGGTA GACCGCATTA TCGAACTCGA CGGCAGACGT
CGTCAGGTCC AGCAGGAACT GGACGACGTG CTGGCTGCGT CCAACAACAA AGCCAAGGAA
ATCGGCGCAT TAATGAAATC CGGCCAGAAA GCCGAGGCAG AAGCTGCCAA AGCCGACACT
GCCGCATTGA AAGAGCGTTC CAAAGCTTTG GAAGAAGAGC ATAAAGCATT CGAAGAAAAC
TTGCTGCAAG AGCTCGTAAA GCTCCCGAAC CTCCCGCACG AAAGTGTGCC CGAAGGCCGC
AGCGCGGACG ATAATGTGAC CGTTCTCGAA GCCGGTGCCA AGCCCGCATT GCACGAAGGC
GCATTGCCGC ATTGGGACCT GATCAGGAAG CTGGGTGGTA ACCTGGCCCC GATCATCGAC
TTTGAGCTCG GTAACAAAAT TGCCGGTGCC GGTTTCCCCG TGTACAAAGG CAAAGCTGCC
CGTTTGCAGC GCGCCATGAT CGCATTCTTT CTCAGCGAAG CGGGCAATGC AGGTTACAAC
GAGGTGCAGC CGCCGATCGT GGTGAATGCT GATTCAGGAT TCGCGACCGG GCAGTTGCCG
GACAAGGAAG GTCAGATGTA CCACGCGACT GTCGACGATT TGTACCTTAT CCCGACCGCC
GAAGTGCCTG TGACCAATCT TTATCGCGAT GTAATCGTGG CTGAAAGTGA GTTACCGGTG
AAAAACGTGG CATTTACGCC GTGCTTCCGC CGCGAAGCGG GCAGCTGGGG TGCACACGTA
CGCGGGCTGA ATCGTTTGCA CCAGTTTGAT AAGGTGGAAA TCGTGCAGAT CAACAAGCCG
GAGGATTCTT ATAAAGCCCT CGACGAAATG GTGGAGCACG TCAAAATGCT CCTCGAAAAG
CTGGAACTGC CTTACCGCAT TCTCCGCTTG TGCGGCGGCG ATATGGGTTT CACGTCCGCA
TTGACTTACG ATTTCGAAGT ATGGTCGGCC GGGCAGGGGC GCTGGCTGGA ATGCAGCTCG
GTTTCCAACT TTGAAACCTA CCAGGCCAAC CGTCTGAAAC TGCGCTACAA AAATGCCGAC
AAGAAAACGC AGCTGCTCCA CACATTGAAC GGCTCTGCAT TGGCATTGCC GCGTATTCTG
GCCGCATTGC TGGAAAACAA CCAGCAGCCC GACGGAACCG TGAAAGTACC GGCGGTACTG
GTGCCATTCT GCGGGTTTGA TGTGATTGAG TAA
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| Protein sequence | MLQTNFIREN RELTIAGLTK KHFKDAEQAV DRIIELDGRR RQVQQELDDV LAASNNKAKE
IGALMKSGQK AEAEAAKADT AALKERSKAL EEEHKAFEEN LLQELVKLPN LPHESVPEGR
SADDNVTVLE AGAKPALHEG ALPHWDLIRK LGGNLAPIID FELGNKIAGA GFPVYKGKAA
RLQRAMIAFF LSEAGNAGYN EVQPPIVVNA DSGFATGQLP DKEGQMYHAT VDDLYLIPTA
EVPVTNLYRD VIVAESELPV KNVAFTPCFR REAGSWGAHV RGLNRLHQFD KVEIVQINKP
EDSYKALDEM VEHVKMLLEK LELPYRILRL CGGDMGFTSA LTYDFEVWSA GQGRWLECSS
VSNFETYQAN RLKLRYKNAD KKTQLLHTLN GSALALPRIL AALLENNQQP DGTVKVPAVL
VPFCGFDVIE
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