Gene Dfer_3750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3750 
Symbol 
ID8227336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4567867 
End bp4568472 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content50% 
IMG OID644931582 
Productputative transcriptional regulator, Crp/Fnr family 
Protein accessionYP_003088119 
Protein GI255037498 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.44373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTCT CCGAAGACAT AAAGCCGCTG CATCACCTGC TCGAAGCCTC CAAGTTCATG 
GTTTCGGACG AGATCCGGGA GAAGTTTCAG CAAAACCTGA AAAGGTTTAT GATCCCGAAA
GGCCGCGTGC TCGTCGATCT GGGACAGGTT AGCCCGTCGC TGTATTTCAT TGAAAAAGGG
GTGATGCGCA CGTACTACCT GCGCGGCTCG GAGGATATTA CCTCGTTGCT TGTCTCGGAA
GGTGACATTG TTTGCATTGC GGAAAGCTTT TTGCTGCAAA AACTTTCAAA TGAAGTTTTG
GAAACACTGG AAGACACGAC GGTTTATGCG CTCTCCTACG ATTCGTACCG CAAGCTCGTC
GAAGAAGATG CCTACATGGG CAAACTGGCC GTGAAGTTAC TGGAACAGCA TCTGATCAAT
TTTACCGACA AGGTGAAAGT TTTCAAATAT CTGTCTGTCG AAGAGCGCAT TGCACATTAT
ATCAGCCAGC CGTCGTCGCT TTTCCGCCGC ATCCCCGATC ATTATATTGC CACTTACCTT
GGCACCACGC CGGCGACTTT CAGCCGTTGC CTGAAAACGG TCCCGTTCGA AAAGAGTCGT
CCCTAA
 
Protein sequence
MQLSEDIKPL HHLLEASKFM VSDEIREKFQ QNLKRFMIPK GRVLVDLGQV SPSLYFIEKG 
VMRTYYLRGS EDITSLLVSE GDIVCIAESF LLQKLSNEVL ETLEDTTVYA LSYDSYRKLV
EEDAYMGKLA VKLLEQHLIN FTDKVKVFKY LSVEERIAHY ISQPSSLFRR IPDHYIATYL
GTTPATFSRC LKTVPFEKSR P