Gene Dfer_3748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3748 
Symbol 
ID8227334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4565871 
End bp4566986 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content50% 
IMG OID644931580 
Producthypothetical protein 
Protein accessionYP_003088117 
Protein GI255037496 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.012971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTTT TAGCTAAATA TAGATACATC GTCGCGTTCA TGGCCATTGC CCTTGCGCCG 
ACAGCGGCAT CCGCACAAAC CATTACCATT GACTTTCAAA ACAAAGTGGT AAGTCCGGAT
GGTCTAACCT GGACGTTTGA TATCGCCGCG AAAGGAATTG CGGTGGGAAC GATTTACGAA
GGACCCGACA ATGACAACTG GCAGGCGATG AACATCAGGT TGGATTTGGA TTTGCCGGCA
GGAGTTACCA TTGTAGGTGG CTCAGGATCT GGCGAGCTTG CAAATACCAC CGGCCAGGTA
GGCGTTCAGA CGGCTGTTCC CGGTATAGGG TCAGTTGGCA AATCCGCACT TGGATTGACA
ATCGCAAGAT CGGCTCCTCC GGGCTTGCCT GGCCAGCAGG ACATTAATGT CAACGACTAC
ACCAAGCTTG CCACATTTAC CGTCACTTTC TCGGGACAGG TGTTTAATAG CACCAAAGCG
TATCCGCGAC TGGCTCTGAA CAAAGATGGA AGTTCCTGGA CCAACGTCTC TGATTCTAAA
CGTCGTCCCA TCTCTTTCGG CGGAGCTCCT GGCTCCACAA TGGGCACCAT TACGCTCCCG
GTCAAACTGG TGAACTTCGA TGCAAAAAAG GAAAATAGAA CCGCTCATCT GACCTGGGCA
ACATCCGAAG AGATCGATGC AGCCTATTTT GAAGTTCAAA AGAGCTCCGA TGGGAAAAGC
TGGAACGCCA TTTCAAAAGT GAACGCCCAA GGTGATTCCA AACAGGTAAC AAAATACGAG
TCAACAGATG CATCACCGTA CGGCGGTACC AACCTTTACC GACTTCACAT GGTAGACCTG
GACGGTAGCG ACGCATACAG CACAATACGG AGTCTGGTGT TCGAAAGCAC TTCCGTTGCA
CTTTACCCCA ATCCCGCCCA GAAGGCGTTG TACGTAAAAA CCGATGCAAA TGAGAAGGTG
AAGGCGGTTG ACATTACCGA CTTGCAAGGA CGAGTGATTT ATAAAGGCAA TGCAACTGCT
ATCGATACAG ATCAATACGC GGCTGGAAAA TATGTAGTGA GCGTTACGCT GGAAAACGGC
ACTGTCAGCA GGCATGAAGT GATTATAGCA CCATAA
 
Protein sequence
MRFLAKYRYI VAFMAIALAP TAASAQTITI DFQNKVVSPD GLTWTFDIAA KGIAVGTIYE 
GPDNDNWQAM NIRLDLDLPA GVTIVGGSGS GELANTTGQV GVQTAVPGIG SVGKSALGLT
IARSAPPGLP GQQDINVNDY TKLATFTVTF SGQVFNSTKA YPRLALNKDG SSWTNVSDSK
RRPISFGGAP GSTMGTITLP VKLVNFDAKK ENRTAHLTWA TSEEIDAAYF EVQKSSDGKS
WNAISKVNAQ GDSKQVTKYE STDASPYGGT NLYRLHMVDL DGSDAYSTIR SLVFESTSVA
LYPNPAQKAL YVKTDANEKV KAVDITDLQG RVIYKGNATA IDTDQYAAGK YVVSVTLENG
TVSRHEVIIA P