| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3738 |
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| Symbol | prmA |
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| ID | 8227323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4550167 |
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| End bp | 4551105 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644931569 |
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| Product | ribosomal protein L11 methyltransferase |
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| Protein accession | YP_003088107 |
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| Protein GI | 255037486 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2264] Ribosomal protein L11 methylase |
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| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.71543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAAT GGGTGCTTAA AACAATCCTT GCAACCCATC CGCTTGCATT CCTGAAAATT
TTCAACACCT TCACCACACG ATTTTTACCA ATAACTATTA CAATGAATTA CATCGAACTG
GATTTGAAAG TGGACCCCGA GTTTTCGGAG ATATTGATGG CGGAGCTGGG CGAGGCGGGG
TTTGAGTCGT TTGTAGAGAC GGACGAGGGA TTGCTCGCCT ACATTCAGGA GGGCGATTTT
GATGAACAGG CTATCCATGA TTTAACGGCC AAATACCTGG ATTTAACGAC AATAGCCGCA
ACATGGAAAT CGTTAGAGAG AAGAAACTGG AACGAGGAGT GGGAAAAAAG CTACGAGCCG
ATCGAGGTGG GTGACCAGGT GCGCGTGCGG GCAACGTTTC ATGAGCCCGA TCCCTCTTTT
AAATACGATT TGCTGATCCA GCCCAAAATG TCGTTCGGCA CAGGGCATCA CGAAACGACC
TGGCTGGTCA TGAACGAGCA ACTCAGCCTG CCGCACGAAC GTCTTTCGAT CATGGATGTA
GGCTGCGGGA CGGGAATTCT GGCGATTTTG GCACATAAAC TGGGCGCTTC GCATCTGCTG
GGCTTCGATA TCGACGAATG GGCCGTGGAA AATACCCGGG AAAACTTTGC GATGAATGCG
CTTCCCGACG ATTCCGAGGT GTTTCAGGGC ACAATCCAGG ACGTTCCGCA GGAGAAGGTG
TTTGGCGGAG TGCTGGCCAA TATCAACCGG AACATCCTGC TGGCGGAAAT CCCGGCGTAC
GTGCAGCACC TCGCACCCGG CGGCTGGCTC GTTACCAGCG GTTTTTACGA AACCGATCAG
GCCGATATTG AAAAATGCGC CGCCGAAAAC GGCTTGAAAA AGCTCAGATC GAATACCCGC
AACCAATGGG CAACCGTTGT TTTTGAAAAG ATCAAATAG
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| Protein sequence | MGKWVLKTIL ATHPLAFLKI FNTFTTRFLP ITITMNYIEL DLKVDPEFSE ILMAELGEAG
FESFVETDEG LLAYIQEGDF DEQAIHDLTA KYLDLTTIAA TWKSLERRNW NEEWEKSYEP
IEVGDQVRVR ATFHEPDPSF KYDLLIQPKM SFGTGHHETT WLVMNEQLSL PHERLSIMDV
GCGTGILAIL AHKLGASHLL GFDIDEWAVE NTRENFAMNA LPDDSEVFQG TIQDVPQEKV
FGGVLANINR NILLAEIPAY VQHLAPGGWL VTSGFYETDQ ADIEKCAAEN GLKKLRSNTR
NQWATVVFEK IK
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