Gene Dfer_3735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3735 
Symbol 
ID8227320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4546568 
End bp4548382 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content53% 
IMG OID644931567 
ProductGlycogen (starch) synthase 
Protein accessionYP_003088105 
Protein GI255037484 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.860093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAACCAT TTGTCAAAAC CACTAAGAAA AACGTCCTGT TCGAAGTTGC ATGGGAGGTT 
TGTAATCAAG TTGGAGGGAT ATATACTGTC ATAAGGACCA AAGTGCCTGC CATGGTGGAA
AAGTGGGAGG AAAACTACTT TTTGCTGGGC CCTTATTTCG AAAAGAAAGC GTCTTCCGAA
TTTGAGCAGA TTCACGACCT GGACGATTCT CCGGCCGGTC GGATCGTCAA GCGAATGCGC
GAAATGGGCT TTGCGGTGTA CTACGGCTAC TGGCTCGTGA CCGGCAAACC GCGCGTCGTG
CTGTTCGATA TCGACAGCAT TATGAGCCAG CTCGATGTGA TCAAATTCAA CCTTTGGGAA
AGAAACCGCA TTCCGACAAT CAACGTCGAA CATCTTGTCA ATCAGACGCT TTGTTTCGGA
GAACTTGTAC GTATATTCCT GAAAGAATAT GCGGATGAGA ATGCGAAACG GGAAGAGATT
TTTGCGCAGT TCCACGAATG GATGGCCAGC AGCGGCTTGC CCGAGCTGAA ACGTGAAAAT
GTGAAAGTTG CCACGACGTT TACCACGCAC GCTACCATGC TGGGCCGCTA CCTGGCGCAG
AATGTCTCAG GTTTTTATAA CAAACTGCCG TTCTTCGACT GGGAACAGGA GGCCAAAAAC
TATGGCATCG TGGCCCAATG CTCGATCGAG CGCCAGGCCG CGCTGAGCGC ACATGTACTC
ACCACGGTGA GCGACGTGAC TGCCCGCGAA TGCGAGGTGT TCCTCGGCCG CATGCCCGAC
CTCGTCACGC CCAATGGCCT CAACGTGGTG CGTTTCCAGG CGGTCCACGA GTTCCAGAAC
CTGCATTTGA AGCACAAAGA GCGCATTCAC GAGTTCGTAA TGGGGCATTT CTTTCCCAGC
TACTCTTTCG ACCTCGACAA AACGCTGTAC TTTTTCACCT CTGGCCGCTA TGAGTATTCC
AATAAAGGTT ACGACCTCAC GCTGGAAGCC CTGGCGCGCC TGAACTGGAA AATGGTACAG
GCCAATATGG ACATGACGGT AGTGATGTTC ATCGTCACCA AGCAGCCATA CACGTCGGTG
AACCCTGATG TGCTGCAATC CCGCGCGGTG CTAAATGAGT TGCAGGAAAC GTGTACGGCC
ATTGAAAAGG AAGTGGGCGA AAAGCTCTTC CTCGCGACGG CATCCGGCAC CGACCATAAA
ATGCCCGATC TAAACGAATT TGTCGACGAA TATTGGCGCC TGCGCCTCCG CCGGACGATC
CAAAGCTGGA AAACCGACAA GTTGCCGGCA TTCGTGACCC ACGATTTGAA GCAGGAGGAC
GGCATTACCG ATTTCTGCAA GCGCGCCAAC CTCGTCAACA ACGAGCGCGA CCGCGTGAAG
ATCGTTTATC ACCCGGATTT CATCGCATCT ACGAACCCAT TGTTCGGTCT GGATTACGGT
CAATTTGTAC GCGGCTGCCA TCTGGGCGTT TTCCCGAGCT ACTACGAACC CTGGGGTTAC
ACGCCGTTGG AATGCGTCGT CCGCGGCGTG CCAACGGTCA CCAGCGACCT CTCCGGCTTC
GGCGATTACA TCATGCAAAT CATGCGTGAC TACGAAAACC GGGGCATTTA CGTGATCAAC
CGCAAATCCC AGAATTTCTC GCAAGCCGCT GACCAGCTCG CCGACATCCT CTTCAAATTC
GTCCGCATGC AACGCCGCGA CCGCATCATG CAGCGCAACC GCGTCGAGAA TATCTCGGAT
GTTTTCGACT GGATGAATTT GCGGTCTTAC TACGATACGG CGCACGATTT GGCTGCGAAG
CGGAGGAAAC CTTGA
 
Protein sequence
MEPFVKTTKK NVLFEVAWEV CNQVGGIYTV IRTKVPAMVE KWEENYFLLG PYFEKKASSE 
FEQIHDLDDS PAGRIVKRMR EMGFAVYYGY WLVTGKPRVV LFDIDSIMSQ LDVIKFNLWE
RNRIPTINVE HLVNQTLCFG ELVRIFLKEY ADENAKREEI FAQFHEWMAS SGLPELKREN
VKVATTFTTH ATMLGRYLAQ NVSGFYNKLP FFDWEQEAKN YGIVAQCSIE RQAALSAHVL
TTVSDVTARE CEVFLGRMPD LVTPNGLNVV RFQAVHEFQN LHLKHKERIH EFVMGHFFPS
YSFDLDKTLY FFTSGRYEYS NKGYDLTLEA LARLNWKMVQ ANMDMTVVMF IVTKQPYTSV
NPDVLQSRAV LNELQETCTA IEKEVGEKLF LATASGTDHK MPDLNEFVDE YWRLRLRRTI
QSWKTDKLPA FVTHDLKQED GITDFCKRAN LVNNERDRVK IVYHPDFIAS TNPLFGLDYG
QFVRGCHLGV FPSYYEPWGY TPLECVVRGV PTVTSDLSGF GDYIMQIMRD YENRGIYVIN
RKSQNFSQAA DQLADILFKF VRMQRRDRIM QRNRVENISD VFDWMNLRSY YDTAHDLAAK
RRKP