Gene Dfer_3709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3709 
Symbol 
ID8227294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4520022 
End bp4520381 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content52% 
IMG OID644931541 
Productprotein of unknown function UPF0102 
Protein accessionYP_003088079 
Protein GI255037458 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAG CAAACGACCT CGGCCGCTGG GGCGAAACTA CCGCGGCATC CTTCCTTGCA 
GAAAAGGGCT TCAAAATCAT CGCCAGAAAT TACCGCAACT GGCAATCCGA GATCGATCTG
ATCGCGGCGA AGGATGATAT GCTGATTTTT ATTGAAGTGA AAACGCGTAC GGGCATGGCA
TTCGGGATGC CGGAGGAATT TGTGAACGTC ACCAAGGCCA GGCTGATCAT GCGTGCCGCG
GAGCAGTATA TTTTCGATGT GGATTGGGAA AATGACGTTC GGTTCGACAT CATTTCCATC
CTTGTCCTGC CCGATGGCTC AACCGACATC CGGCACATCG AAGATGCATT CAGCCGGTAA
 
Protein sequence
MSQANDLGRW GETTAASFLA EKGFKIIARN YRNWQSEIDL IAAKDDMLIF IEVKTRTGMA 
FGMPEEFVNV TKARLIMRAA EQYIFDVDWE NDVRFDIISI LVLPDGSTDI RHIEDAFSR