Gene Dfer_3692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3692 
Symbol 
ID8227277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4493045 
End bp4494406 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content52% 
IMG OID644931524 
Productdihydroorotase 
Protein accessionYP_003088062 
Protein GI255037441 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID[TIGR00857] dihydroorotase, multifunctional complex type 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.3274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGC TGATCGTAAA TGCCCAGGTC GTAAATGAAA ACCAGGTTCA GTATTTAGAC 
GTAATAATTG AAAATGGTCA CATTAAAAAA ATCGGAAGCG ACTTGCAGCA CACGCCAGCC
GACCGGGTGA TCGACGCGAA AGGGCTTTAT CTGATGCCGG GCGTGATCGA CGACCAGGTG
CATTTCCGCG AGCCGGGCCT CACACACAAG GCGAATATTT ACACAGAATC CAAAGCGGCC
GTTGCCGGAG GGGTTACTTC CTTTATGGAA ATGCCCAACA CCGTGCCCAA CACGCTCACG
CAGCTGTTGC TCGAAGACAA ATACCAGATC GGGGCCAACA CGTCGCTGGC CAACTACTCG
TTTTTCATGG GCGCTTCGAA CGACAATTAC GACGAGGTCA TGCGTACCGA TCCTACGAAG
GTTTGCGGGA TCAAGATATT CATGGGGTCT TCTACGGGAA ATATGCTCGT GGACGCGCCG
GAGGTTTTGG AAAAACTGTT TGCCAATGCA CCCTGCATTA TCGCCACGCA TTGCGAGGAC
GAGCCGACGG TGAAGGCCAG ATTAGCCCTT TTCAAAGAAA AATACGGCGA TGACGTGCCC
TACGACATTC ACGCATTGAT CCGCAATGAG GAAGCTTGCC TCAAATCATC CACATTCGCC
AGTTCGCTCG CGCATAAACA CGGCACGAGA CTGCACATTC TGCACATTTC GACGGGTGAT
GAAGTTCATC TGTTCGAAGT AGGAAACCGG AGCAATGGTA AGATCGTGCT CGCCAACGGT
CAGCCCAAAC TGGTTACCGC CGAGGCCTGC GTGCACCATT TGTGGTTTGA TGCGGAAGAT
TACCGGAAAT TAGGTAATGA GATCAAATGC AACCCGGCGA TCAAAGCGCC ACACCACAAA
GAAAAAATCT TGCAAGCGGT GCTCGACAAT CGCATTGACG TCATTGCAAC CGACCATGCG
CCGCACACCA TCGAGGAAAA GGCGCAGCAT TACTGGCAGG CACCATCCGG CTTGCCGCTC
GTTCAGCATA CGTTGAACGT AATGTTGGAA TTAAGCAGAG AAGGCAAGAT CTCCATCGAC
CGCGTGGCCG AAAAAATGAG CCACGCCGTG GCCGATCTTT TCGATATCAG CGGACGTGGT
TATATTCGGG AAGGGTATTG GGCAGACCTG ATCCTGGTGG ACCTGAATGC AACGACGCAG
GTAGAAAAGG CCAATATTTA CTCCAAATGC GGCTGGTCGC CTTTTGAAGG CACGGAGTTC
CACTCACGCA TTACCCATAC GTTCGTATCG GGGCACCTCG TTTATGAGAA TGGAGAATTT
GATGAAACGG TGAAAGGAAA GCGCTTAACC TTTAGCCGCT AG
 
Protein sequence
MTTLIVNAQV VNENQVQYLD VIIENGHIKK IGSDLQHTPA DRVIDAKGLY LMPGVIDDQV 
HFREPGLTHK ANIYTESKAA VAGGVTSFME MPNTVPNTLT QLLLEDKYQI GANTSLANYS
FFMGASNDNY DEVMRTDPTK VCGIKIFMGS STGNMLVDAP EVLEKLFANA PCIIATHCED
EPTVKARLAL FKEKYGDDVP YDIHALIRNE EACLKSSTFA SSLAHKHGTR LHILHISTGD
EVHLFEVGNR SNGKIVLANG QPKLVTAEAC VHHLWFDAED YRKLGNEIKC NPAIKAPHHK
EKILQAVLDN RIDVIATDHA PHTIEEKAQH YWQAPSGLPL VQHTLNVMLE LSREGKISID
RVAEKMSHAV ADLFDISGRG YIREGYWADL ILVDLNATTQ VEKANIYSKC GWSPFEGTEF
HSRITHTFVS GHLVYENGEF DETVKGKRLT FSR