Gene Dfer_3686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3686 
Symbol 
ID8227271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4485299 
End bp4486378 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content54% 
IMG OID644931518 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_003088056 
Protein GI255037435 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0985962 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATC AGGGCAAGCG CCGTTTCAGG GCAGCCCGGT TCATCATTTT TTGTTTAAAA 
CCTGACATTA TGAAAGCCGC TATTTTAAAA AACCTTCATG AGCCGCTGGT GATTGAAGAC
ACGCAGAAGC CCAATCCGGG CCCGGGTGAG GCGCTTGTTG AGCTTAAAGC CGCGTCGCTC
AACCACCGCG ACGTTTGGAT ACAAAAAGGA CTTTACCCGC GCATTACCAC GCCCATTATC
CCCGGTTCGG ACGGTGCGGG AATTGTGACG GAGGTGGGTG ATGGTGTAGC CAAAAGCTGG
ATCGGCAAGG AAGTGATCAT TAACCCGTCG CAAAACTGGG GCGATAATCC TGATTTTTAC
AGCGAAGACC ATAAAATCCT CGGCCTGCCA GATAATGGGA CATTTGCGGG ATACGTCAAA
ACCGAAGCAA AATACCTGGC CGAAAAACCT GCGCATTTGT CGTTCGAAGA AGCGGCTGCA
TTGCCGATGG GCGGGCTCAC GGCCTGGCGG TCGCTCATAA CGCGTGCCCG GTTCCGTGCG
GGCGACCGTG TGCTCGTAAC GGGTGCGGGG GGCGGTGTGG CATTGTTTGT GATCCAGTTT
GCGATCTCCT CCGGTGCGGA AGTGTGGGTA ACCTCCGGCT CTGATCAGAA AATCCAGCGG
GCAATTGAAA TGGGTGCCAA AGGCGGCATT AATTATAAAA ACCCGACCTG GTTCCGAGAC
TTGCTCGTGA AAGCGCGCGG ACCGAAGACG GGTTACTTCA ATGTGATTAT CGACAGCGCG
GGAGGCCCCG GTTTTGCCAA ACTGATCGAC ATTGCGGCAC CGGGTGCGCG CATTTGCTTC
TATGGCGGAG GCACGGGCAA CATTACTGAC ATTGTACCTG CGAAAGTGTT TTTCAAACAG
CTCAACATAT ACGGCAGCAC GATGGGCACC GAGCAGGAGT TTGCGGAAAT GGTGCAGTTT
ATCGGCGAAA AGCAAATCGT ACCGATTATA GACAAGGTGT TTCCGCTGGA AGAAGCCGAG
CAGGCGCTGC GCTACATGGA TTCGGGCCAG CAGTTTGGCA AGATCGTGCT TTCGATCTGA
 
Protein sequence
MMNQGKRRFR AARFIIFCLK PDIMKAAILK NLHEPLVIED TQKPNPGPGE ALVELKAASL 
NHRDVWIQKG LYPRITTPII PGSDGAGIVT EVGDGVAKSW IGKEVIINPS QNWGDNPDFY
SEDHKILGLP DNGTFAGYVK TEAKYLAEKP AHLSFEEAAA LPMGGLTAWR SLITRARFRA
GDRVLVTGAG GGVALFVIQF AISSGAEVWV TSGSDQKIQR AIEMGAKGGI NYKNPTWFRD
LLVKARGPKT GYFNVIIDSA GGPGFAKLID IAAPGARICF YGGGTGNITD IVPAKVFFKQ
LNIYGSTMGT EQEFAEMVQF IGEKQIVPII DKVFPLEEAE QALRYMDSGQ QFGKIVLSI