Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3645 |
Symbol | |
ID | 8227230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4442739 |
End bp | 4443737 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644931477 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_003088015 |
Protein GI | 255037394 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0804567 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCA TTTTCCTCAC CTTATTGTTG CTCGCCGGCA TCGCCTCGAT CGCCGTCGCT CAGTCGAAAC GAAAGCCGCT CAAAAGAAAA GTAATATGCA TTGATCCGGG CCATGGCGGC ACCGCCGCTA CCGACAGCTA TCGCGTGGGC CCGGGCGGAG AGCGGGAAGA ATGGGTTAAC CTCCGTGTGG CGTTGCTATT GCAGCAAATG CTCGAAAAGA AGGGCGCCAG GGTGCTCATG ACGAGGACTA CCGACGTGGA AGTGCCGCTG GCCGATCGTG CAAAGCTCGC CTGCGACCGC GAAGCCGATC TCTTCGTATC AATTCACCAT AATGCGACGG CCGATTCGTC GGTGAACTTC CCGATCATTT ATTTTCATGG AAATATGTCG GAGAACGTCG CAAGCGTCAA TTTTGGCAAA GAACTCTCGG CTACGTTGCT GAAACATTTG TACAAACCCG GTACACCGGT TTCGCTGGTG TCGGACTTCA CTATTTTTCC TGATGCGGGC GCATCGGTGC TGAGGAATAC ATATGGCATG CCCGCGCTGC TCGCTGAGGC GTCTTTTTTT ACCAACCCCG CCGAGGAGCG CCGTCTGAAA CAGCCTGAAT ACAACACCGC CGAAGCCCTC GCCTACACCG AGGCCATTGT GGCATTTTTC GCAAAACCGG TTGCGCCGAT TGCCGCAAAG AACTCGAAAG TGCCCGCGAT CCCTGCATTC AAGGTCTTTC AGGAAGCGGA GCGCATGACG CCCATTGCCC GGCGCTGGCG GCAGGATTTC GACGAAGGAA AGGTGTTTAT GACAAAAAAG GAGACGGCAC TGCTCCGCGA ATCGTACGAA CTGTTCACGC GCTCGGCCCG CTCTTTCCCC GACTCCTGGC TCGCCGGCCA AAGTCATCAG AACCGCGCCG TACTGCTGCG GAAACTGGGC AAGGCCACCG AAGCCGGACA GGAGGATCAG CGGTTCAGGG AATATTATGT GCCGATGAAC GGCAAGTAG
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Protein sequence | MNRIFLTLLL LAGIASIAVA QSKRKPLKRK VICIDPGHGG TAATDSYRVG PGGEREEWVN LRVALLLQQM LEKKGARVLM TRTTDVEVPL ADRAKLACDR EADLFVSIHH NATADSSVNF PIIYFHGNMS ENVASVNFGK ELSATLLKHL YKPGTPVSLV SDFTIFPDAG ASVLRNTYGM PALLAEASFF TNPAEERRLK QPEYNTAEAL AYTEAIVAFF AKPVAPIAAK NSKVPAIPAF KVFQEAERMT PIARRWRQDF DEGKVFMTKK ETALLRESYE LFTRSARSFP DSWLAGQSHQ NRAVLLRKLG KATEAGQEDQ RFREYYVPMN GK
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