Gene Dfer_3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3616 
Symbol 
ID8227201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4413028 
End bp4414113 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content55% 
IMG OID644931448 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_003087986 
Protein GI255037365 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.537864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.460896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTTA CGCTCATCGT TTTCCTCCTG CTTGTTCCCG GTTTCGTGGT GATCGGCGTG 
TACCTGGAAC GGAAGGTTTC AGCATTCATC CAGGACCGTC TCGGACCGAT GGAAGTAGGG
AAATGGGGCT TGTTGCAGCT TTTCGCAGAT TTGCTCAAAC TGCTTCAAAA AGAGGACATT
GTTCCCAAAG CCGCCGACCG CAGGTTGTTC CTGACTGCTC CGTTCGTCAT TTTCATTTCC
GTTTTCGCAG GCTTTGCCGT CGTGCCGCTG GCGCCGGAAT TGGCCGGCTC GGGCGCGGCT
GTGGGCGTTT TCTTCCTGCT CACGATCGTG TCGGTGGATG TGATCGGGCT GCTGATGGCG
GGTTGGGGCT CCAACAACAA ATTCGCATTG TACGGCGCTA TGCGGGCCGT GGCACAAATC
GTTTCCTACG AAATTCCGCT CGGACTGTCG ATTCTGTGCG TAATTATGCT CACACAAACG
CTCGATTTAC AGGTAATCAG CTATCAGCAA GGCATTTATA CCTCCGAAAC CATTTATCTT
TTCGGCATGC GCGAACTCGG GATCGATGTG AGCGGTGTGG GCGGATTTTT GTCCTGGAAT
ATCGTCCGCA ACCCCTTCCT GCTAATCGCC TACGTCGTTT TCTTCATCGC TTCGCTCGCT
GAATGTAACC GTGCGCCGTT CGACTTGCCG GAGGGCGAAT CGGAACTGGT GGCGGGATTC
CATACCGAAT ATTCGGGAAT GCGCTGGGCA TTGTTCATGC TGTCGGAATA TGGTATGATG
CTCCTGGTGT CGCTGCTGGG CGCTATTTTG TTCCTGGGAA GCTGGAATAC ACCGCTACCG
AATATCGGGC CCTTGAAACT GGCCGACTGG ACCAGCGGCG AGCCGGGTAC GTTTTTCGGC
TATGTTACCG GCATTTTCTG GCTGTTATCG AAAGCCATGT TCGGCATTTT GATCCAGATG
TGGGCGCGGT GGACGCTCCC GCGTCTGCGT GTAGACCAGC TCATGTACCT CGGCTGGAAA
GTCCTCACGC CCGTAGGGCT GGTGTTGTTT TTTATCTCAG GAATCTGGCG CCTCATTGGC
GTGTGA
 
Protein sequence
MPFTLIVFLL LVPGFVVIGV YLERKVSAFI QDRLGPMEVG KWGLLQLFAD LLKLLQKEDI 
VPKAADRRLF LTAPFVIFIS VFAGFAVVPL APELAGSGAA VGVFFLLTIV SVDVIGLLMA
GWGSNNKFAL YGAMRAVAQI VSYEIPLGLS ILCVIMLTQT LDLQVISYQQ GIYTSETIYL
FGMRELGIDV SGVGGFLSWN IVRNPFLLIA YVVFFIASLA ECNRAPFDLP EGESELVAGF
HTEYSGMRWA LFMLSEYGMM LLVSLLGAIL FLGSWNTPLP NIGPLKLADW TSGEPGTFFG
YVTGIFWLLS KAMFGILIQM WARWTLPRLR VDQLMYLGWK VLTPVGLVLF FISGIWRLIG
V