| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3589 |
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| Symbol | |
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| ID | 8227174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4382234 |
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| End bp | 4384072 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644931423 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_003087961 |
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| Protein GI | 255037340 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.512863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGAC AGGTTAATAC GAGCATTGAA ATCGAAGGCG GGATCGAGAT TACGCGGCAC
CTTGGGCTGG TGATCGAGCA GGATTTGTTT GCTCACCACT GGTTCGAGCT ACTGGTCCCG
TTCGACCAGC TGGAAAACGA AGGTGAGCAT TTTTTCAACC GCTCGCACCG GGCGGTAATG
GGCAAGAAAA TCACTTTTTC GTTCAGTCCG CGCCTCGGCT CCGATTCTTT CGATTTTGTA
TTTCAAGGCA TTGTAACCGA AATCCGGCTG CGTAGCCTGA GCGACATGAG CAGCGCATTT
GTATTGAAAG GATTTAGCCC GACTATCGTT CTCGAAGATT CCATTCAGCG GCGGTCGTTC
CTGCGCGGGA CGGTCCAGGA TATTTTCAAT GCAGTGCTAC AACCCTACCC GCAGAATTTA
CTCCGAAAAC AGCTCAGCCC GGAAAATGGG AGCAGGCAGG TGCCATTTAC CCAATACAAC
GAAAGCAATT ACAAGTTCCT CTGCCGCGTC GCCGACCGTT GCTGCGAGTG GTTTTACTAC
AATGGCCGTG AGCTGGTGCT GGGAAACAGC GGTTCGGAGG AAGTCGATTT TCTGGTGGAT
GGTTTGCAAA ACTTCGACGT CGCATTAAAA CTGCAACCGG CTGCATTCAG TTTTGAAGGA
TACAACTACA CCGTTCCGCA GGCATTTACA GGGCAATCGT CGCAGCAGCA TGTGGACGGC
CTTACCTCGC TCAGCGAGTT TGCATTGGAG CAGTCCGACA GCCTTTTTGC ACAAACCTCC
CTCCTGCCGT CGCCCGAAAT CGTAAGCGGG CAGGGCGAAA TCGACGAACT TACCAAAATG
GAGCGCTCGG CGCGGGTAAC CTCGATGGTC GACTTCAAAG GCTCTGGCGA AACTCCGACC
ATGAGCGTGG GAACGGTGCT GGCCGTGAAA GGCCGCCGGC TGAATGAGCG TGGAGAGGAA
TACCAGGAGA ATTTCGGCAA ATACCGGGTC GTGCATATCC GCCACGAGGT GAACACGGCC
GGCAGCTACC GCAACACATT CAATGCAGTT CCCGAGTCGG CGCAGCATCC GCCTAATAAT
CCATTCGTGC GAAACCCGCT CGGCGAGACG GAACAGGCGG AGGTGATCGC CAACGACGAT
AGTGCAAGCC TCGGGCGCGT GCGCGTGAAG TTCTTTTGGA GCCAGGCCCG GCAGCAGGAC
CAGGAGTCGA TCTGGATGCG GGTGGGGACG ATGCACAATG CAGCGGGCCG CGGCGTCAAC
TTCGTGCCCG AGGTAGGTGC CATGGTGATG GTTGGCTACG AGGGTAACCT GGCCGAAAAT
CCGTTCGTGA TGACTTGCCT TTATCCCAAA CCCGAAGAAG AGATCAGCTA CTCGCCCGAA
AACAACGATT TCAAAGTGAT CGCCACGCGG TCGGGAAACA TGGTGCTGTT CATCGATGAA
GACGGTGATG CCAAAATCCA GATCAGCAAC CGGAACAAAA CGGACACATT TCTGGTATTC
GCATTCAAGG ACGACGGCAA GATCAGGATT CACGTCGAAA ACGGGCTTTT CGAGGTCAAA
TCCAAACAAA TAAATATTGA GGCGACCGAG GACATCACGG TAAGCGCGGG CGGGAAATTC
GACTTACATG CTGGTGAAAT TTCCATGAAG GCCGATCAAA GCATTCAAAC AGAGAGCGGT
ACCGAGACGA AAATCAAGGC AGGGACCGAG CTGGAAACCG AGGGCACCGC ATCCGCAAAA
ATGAAAGGGG CGCAGCTCAC GCTGGAAGGC GACGCGCTTG CCGAACTGAA AAGCGGCGGC
ACAACGGTCA TCCAGGGCTC GCTCATTACG CTCAATTAG
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| Protein sequence | MARQVNTSIE IEGGIEITRH LGLVIEQDLF AHHWFELLVP FDQLENEGEH FFNRSHRAVM
GKKITFSFSP RLGSDSFDFV FQGIVTEIRL RSLSDMSSAF VLKGFSPTIV LEDSIQRRSF
LRGTVQDIFN AVLQPYPQNL LRKQLSPENG SRQVPFTQYN ESNYKFLCRV ADRCCEWFYY
NGRELVLGNS GSEEVDFLVD GLQNFDVALK LQPAAFSFEG YNYTVPQAFT GQSSQQHVDG
LTSLSEFALE QSDSLFAQTS LLPSPEIVSG QGEIDELTKM ERSARVTSMV DFKGSGETPT
MSVGTVLAVK GRRLNERGEE YQENFGKYRV VHIRHEVNTA GSYRNTFNAV PESAQHPPNN
PFVRNPLGET EQAEVIANDD SASLGRVRVK FFWSQARQQD QESIWMRVGT MHNAAGRGVN
FVPEVGAMVM VGYEGNLAEN PFVMTCLYPK PEEEISYSPE NNDFKVIATR SGNMVLFIDE
DGDAKIQISN RNKTDTFLVF AFKDDGKIRI HVENGLFEVK SKQINIEATE DITVSAGGKF
DLHAGEISMK ADQSIQTESG TETKIKAGTE LETEGTASAK MKGAQLTLEG DALAELKSGG
TTVIQGSLIT LN
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