| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3554 |
|---|
| Symbol | |
|---|
| ID | 8227139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 4347105 |
|---|
| End bp | 4347338 |
|---|
| Gene Length | 234 bp |
|---|
| Protein Length | 77 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644931389 |
|---|
| Product | phage shock protein C, PspC |
|---|
| Protein accession | YP_003087927 |
|---|
| Protein GI | 255037306 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.385576 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATA ATAGATTATT CCGTAACACC AGCAACAAAA TGATCGGCGG AGTAGCCTCA
GGATTAGCCG ATTACTTCGA AATCGACGTC ACCATTATCC GTGTATTGTT CGTGCTCGCT
GTATTCATTC CGGTCACCTT CCCCGTCATA TTGTTTTACA TCATCCTTTG GATCGTCATG
CCCGATTCAG CAAAACGACC CAAAGCGCTG GAAGAAGGGC ACATTCCTTC TTAA
|
|---|
| Protein sequence | MNHNRLFRNT SNKMIGGVAS GLADYFEIDV TIIRVLFVLA VFIPVTFPVI LFYIILWIVM
PDSAKRPKAL EEGHIPS
|
|---|
| |