Gene Dfer_3537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3537 
Symbol 
ID8227122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4319068 
End bp4319862 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content55% 
IMG OID644931372 
ProductABC transporter related 
Protein accessionYP_003087910 
Protein GI255037289 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.878481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAGG TAAGGAATGC CGGATTTGAA GTAAAAGGCC GCAAACTGCT GGAAAATGTC 
AGTTTTTCGG TCAAACCTGG GGAATTCTGG GCGATTATCG GGGCTAATGG CGCCGGAAAA
TCGACATTAA TCAAGCTGCT TTCCGCAGAG CAGCCAGCCA CGTCCGGCTC GGTGCATTTC
CACGACCGCG ACCTTCGAAA GTATAAACTG AAAGAGCTGG CTACCAAACG GGCGGTGCTA
TCCCAGCAAA ACAACATTGC ATTATCCTTC ACGGCGCAGG AAATTGTGCT GATGGGCCGC
TATCCGTTTT ACGACGCCGA TCTATCGCAG CGCGACCTGG CGATCGTAGA TATGTGCCTT
AAAAAAGTCG GCATCGGCCA TTTGAAAAGT CGTTTGTACC CGACCTTATC CGGCGGCGAA
CAGCAGCGCG TGCAGCTTGC GCGGGCGCTC GCCCAGGTGT GGGAGATCGA AAACGGCCTG
CTGCTGCTCG ATGAACCCAC TACCGGAATG GACCTTTTGC ATCAGTACGA GACATTCCAG
CTTGCCAAGG AACTGACACG CAAGCATTTC GCGGTGGTAG CCGTCGTTCA CGACCTGAAC
CAGGCGTTGC AATATGCCGA CCGCGTGCTG ATGCTCAAAA ACGGACGCCC GCATGCCATC
GGCACACCTG AGACCGTGCT CACCGAGCAG GCCATTCACG AAGCTTTCGG GCTGCCGGTG
CAGATTATCC AACCGGACAC GACGCCTTAC CCGGTAATAG TGCCCCAGGC CTCTGTTTCG
TACCAAATTC CCTGA
 
Protein sequence
MMEVRNAGFE VKGRKLLENV SFSVKPGEFW AIIGANGAGK STLIKLLSAE QPATSGSVHF 
HDRDLRKYKL KELATKRAVL SQQNNIALSF TAQEIVLMGR YPFYDADLSQ RDLAIVDMCL
KKVGIGHLKS RLYPTLSGGE QQRVQLARAL AQVWEIENGL LLLDEPTTGM DLLHQYETFQ
LAKELTRKHF AVVAVVHDLN QALQYADRVL MLKNGRPHAI GTPETVLTEQ AIHEAFGLPV
QIIQPDTTPY PVIVPQASVS YQIP