Gene Dfer_3467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3467 
Symbol 
ID8227051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4243025 
End bp4243612 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content43% 
IMG OID644931303 
Productcytochrome c oxidase subunit III 
Protein accessionYP_003087842 
Protein GI255037221 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0634849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACG TTCAGCAGAT TAAATTGGAA AGAGAGCCGC AGGAGACGCT TTCGATGGAC 
CCGAAGAAAT TCATTCTTTG GCTATTCCTC GTCACGATCA TCATGCTTTT CGCCTCGCAG
AGCAGTGCGT ACCTCGTACG CCGCGCCGAA GGTAACTGGC TCGAATTTGA AATGCCGCAG
ATATTCTGGT ACAGCACGGT GGTGTTGATC ATGAGCAGCG CAGCCATGCA ATGGGCCTAT
TTCTCGGCAA AAAAAGATCA GTTCCAACAA TTGAAAATAG CAATTTCTAT TACTTTTGTA
CTCGGCCTGA TCTTCCTTTA CATGCAGTTT GAAGGCTGGA AAGAGCTTGT GGCGATGAAT
GTTTATTTTG TTGGAAACCC GTCCGGTTCG TTCTTTTACG TGTTCACAGG GCTTCACGGT
TTCCACATTA TCACAGGCCT GATTGTTTTG GTATTCGCAT TGATCTCGGC ATTTAAGCTG
AACATGCATT CCAAAAATCT GAGAAGAATT CAGATCAGTG CTACTTACTG GCACTTTTTG
GATATACTCT GGTTATACCT TTTTGTTTTT TTATTGACCT TTAATTAA
 
Protein sequence
MENVQQIKLE REPQETLSMD PKKFILWLFL VTIIMLFASQ SSAYLVRRAE GNWLEFEMPQ 
IFWYSTVVLI MSSAAMQWAY FSAKKDQFQQ LKIAISITFV LGLIFLYMQF EGWKELVAMN
VYFVGNPSGS FFYVFTGLHG FHIITGLIVL VFALISAFKL NMHSKNLRRI QISATYWHFL
DILWLYLFVF LLTFN