Gene Dfer_3451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3451 
Symbol 
ID8227031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4229587 
End bp4230117 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content44% 
IMG OID644931283 
Productribosomal protein L10 
Protein accessionYP_003087826 
Protein GI255037205 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00335052 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0391621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGGG AAGAAAAAGC AGTAATTATT GACGAGTTAA GTCAGAAATT CGCCAACACT 
CCATACTTCT ACATCACCAA TGCAGCGGGC ATGTCCGTGA GCGAGGTGGA CTCACTGAGA
AGACTTTGCT TCGAACGTGG CGTAGAATAT CGTGTTGTGA AGAATACATT GATTAAAAAA
GCGCTCGAAA CACTAGATAC GGATTATTCT TCTTTCGACG AAGTGTTGAA AGGATTTTCC
GGAGTAATGT TTCACCCGGA GTCAGGTAAA GTACCTGCGC AACTGATCAA GGAATTCAAA
AAGAAATCAG GTAGCGACAA ATTGAAGTTC AAAGGAGCTT CTGTTGACAC TGCCGTTTTC
GTAGGAGAAA GCCAGCTGGA CGTTCTGATT TCACTGAAAT CGAAACAAGA ACTGATCGGC
GAAGTGATCG GATTGTTGCA ATCGCCTGCC AAAAATGTTA TCGGCGCTCT TACAAGCGGC
GGACAGAACC TGGCTGGTAT CTTGAAAACT TTATCTGAAA AAGAAGACTA A
 
Protein sequence
MTREEKAVII DELSQKFANT PYFYITNAAG MSVSEVDSLR RLCFERGVEY RVVKNTLIKK 
ALETLDTDYS SFDEVLKGFS GVMFHPESGK VPAQLIKEFK KKSGSDKLKF KGASVDTAVF
VGESQLDVLI SLKSKQELIG EVIGLLQSPA KNVIGALTSG GQNLAGILKT LSEKED